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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
163 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170041051
CDYT01000016
80614
Bacteroidota
>WENV170041056
CDYT01000378
95559
Bacteroidota
TAG
Leu
>WENV170041063
CDYT01000591
126641
Bacteroidota
TAC
Val
>WENV170041074
CDYT01000670
113604
Bacteroidota
>WENV170041071
CDYT01000670
113604
Bacteroidota
>WENV170041068
CDYT01000670
113604
Bacteroidota
>WENV170041089
CDYT01001160
411543
Bacteroidota
CTG
Gln
>WENV170041088
CDYT01001160
132360
Bacteroidota
GGG
Pro
>WENV170041111
CDYT01001749
235129
Bacteroidota
GCC
Gly
>WENV170041109
CDYT01001749
235129
Bacteroidota
GCC
Gly
>WENV170041113
CDYT01001751
425638
Bacteroidota
CTG
Gln
>WENV170041116
CDYT01001806
301449
Bacteroidota
CGG
Pro
>WENV170041120
CDYT01001819
80607
Bacteroidota
GTA
Tyr
>WENV170041118
CDYT01001819
144590
Bacteroidota
GTT
Asn
>WENV170041117
CDYT01001819
144590
Bacteroidota
GTT
Asn
>WENV170041125
CDYT01002266
239647
Bacteroidota
TTT
Lys
>WENV170041132
CDYT01002570
58715
Bacteroidota
GAG
Leu
>WENV170041131
CDYT01002570
59689
Bacteroidota
CAG
Leu
>WENV170041130
CDYT01002570
235129
Bacteroidota
GCC
Gly
>WENV170041137
CDYT01002578
280513
Bacteroidota
TTT
Lys
>WENV170041153
CDYT01003103
338132
Bacteroidota
GCA
Cys
>WENV170041157
CDYT01003218
280660
Bacteroidota
CCA
Trp
>WENV170041159
CDYT01003241
301449
Bacteroidota
CGG
Pro
>WENV170041171
CDYT01003533
338155
Bacteroidota
CTC
Glu
>WENV170041174
CDYT01003794
235203
Bacteroidota
TTT
Lys
>WENV170041182
CDYT01004042
235207
Bacteroidota
CAT
Met
>WENV170041181
CDYT01004042
235207
Bacteroidota
CAT
Met
>WENV170041198
CDYT01004687
136244
Bacteroidota
TAC
Val
>WENV170041200
CDYT01004687
235207
Bacteroidota
CAT
Met
>WENV170041199
CDYT01004687
235207
Bacteroidota
CAT
Met
>WENV170041209
CDYT01004833
339341
Bacteroidota
GGT
Thr
>WENV170041215
CDYT01005082
58715
Bacteroidota
GAG
Leu
>WENV170041214
CDYT01005082
59689
Bacteroidota
CAG
Leu
>WENV170041238
CDYT01005829
301449
Bacteroidota
CGG
Pro
>WENV170041241
CDYT01005888
52358
Bacteroidota
TGA
Ser
>WENV170041244
CDYT01005897
185921
Bacteroidota
GTC
Asp
>WENV170041247
CDYT01006095
414426
Bacteroidota
CTG
Gln
>WENV170041254
CDYT01006100
59689
Bacteroidota
CAG
Leu
>WENV170041256
CDYT01006103
238121
Bacteroidota
CTT
Lys
>WENV170041276
CDYT01006897
147439
Bacteroidota
TCT
Arg
>WENV170041301
CDYT01008075
144590
Bacteroidota
GTT
Asn
>WENV170041300
CDYT01008075
144590
Bacteroidota
GTT
Asn
>WENV170041322
CDYT01008732
338125
Bacteroidota
CCT
Arg
>WENV170041330
CDYT01008961
414426
Bacteroidota
CTG
Gln
>WENV170041331
CDYT01008963
235097
Bacteroidota
TTT
Lys
>WENV170041335
CDYT01009160
415410
Bacteroidota
TTG
Gln
>WENV170041336
CDYT01009196
343138
Bacteroidota
CCT
Arg
>WENV170041338
CDYT01009196
338164
Bacteroidota
TTC
Glu
>WENV170041337
CDYT01009196
338164
Bacteroidota
TTC
Glu
>WENV170041347
CDYT01009210
154643
Bacteroidota
CAT
Met
>WENV170041348
CDYT01009231
16224
Bacteroidota
GGA
Ser
>WENV170041353
CDYT01009246
80614
Bacteroidota
>WENV170041368
CDYT01009623
20893
Bacteroidota
GGA
Ser
>WENV170041375
CDYT01010016
185921
Bacteroidota
GTC
Asp
>WENV170041374
CDYT01010016
185921
Bacteroidota
GTC
Asp
>WENV170041373
CDYT01010016
185921
Bacteroidota
GTC
Asp
>WENV170041376
CDYT01010017
132360
Bacteroidota
GGG
Pro
>WENV170041377
CDYT01010019
126641
Bacteroidota
TAC
Val
>WENV170041390
CDYT01010616
343138
Bacteroidota
CCT
Arg
>WENV170041392
CDYT01010616
338164
Bacteroidota
TTC
Glu
>WENV170041391
CDYT01010616
338164
Bacteroidota
TTC
Glu
>WENV170041399
CDYT01010884
144596
Bacteroidota
GGC
Ala
>WENV170041405
CDYT01010968
338486
Bacteroidota
CAT
Met
>WENV170041414
CDYT01010972
154643
Bacteroidota
CAT
Met
>WENV170041419
CDYT01010972
353927
Bacteroidota
TTC
Glu
>WENV170041422
CDYT01011160
153993
Bacteroidota
GAT
Ile
>WENV170041424
CDYT01011206
16224
Bacteroidota
GGA
Ser
>WENV170041425
CDYT01011247
132360
Bacteroidota
GGG
Pro
>WENV170041431
CDYT01011283
44852
Bacteroidota
TAA
Leu
>WENV170041450
CDYT01011866
301449
Bacteroidota
CGG
Pro
>WENV170041453
CDYT01012030
144655
Bacteroidota
GGC
Ala
>WENV170041480
CDYT01012747
144655
Bacteroidota
GGC
Ala
>WENV170041481
CDYT01012761
46165
Bacteroidota
TGA
Ser
>WENV170041484
CDYT01012784
338486
Bacteroidota
CAT
Met
>WENV170041497
CDYT01013149
411550
Bacteroidota
CTG
Gln
>WENV170041496
CDYT01013149
411550
Bacteroidota
CTG
Gln
>WENV170041504
CDYT01013154
235097
Bacteroidota
TTT
Lys
>WENV170041505
CDYT01013154
235207
Bacteroidota
CAT
Met
>WENV170041514
CDYT01013401
153993
Bacteroidota
GAT
Ile
>WENV170041519
CDYT01013507
144933
Bacteroidota
TCT
Arg
>WENV170041529
CDYT01013789
144933
Bacteroidota
TCT
Arg
>WENV170041531
CDYT01013791
58714
Bacteroidota
CAA
Leu
>WENV170041530
CDYT01013791
95875
Bacteroidota
TAG
Leu
>WENV170041532
CDYT01013793
419272
Bacteroidota
CTG
Gln
>WENV170041533
CDYT01013793
16220
Bacteroidota
GGA
Ser
>WENV170041544
CDYT01014349
95875
Bacteroidota
TAG
Leu
>WENV170041545
CDYT01014352
338125
Bacteroidota
CCT
Arg
>WENV170041565
CDYT01014718
338132
Bacteroidota
GCA
Cys
>WENV170041564
CDYT01014718
338132
Bacteroidota
GCA
Cys
>WENV170041574
CDYT01015025
425638
Bacteroidota
CTG
Gln
>WENV170041575
CDYT01015056
243025
Bacteroidota
CAT
Met
>WENV170041583
CDYT01015576
144657
Bacteroidota
CGG
Pro
>WENV170041584
CDYT01015576
235180
Bacteroidota
CCA
Trp
>WENV170041598
CDYT01016198
52358
Bacteroidota
TGA
Ser
>WENV170041609
CDYT01016993
338132
Bacteroidota
GCA
Cys
>WENV170041622
CDYT01017803
235097
Bacteroidota
TTT
Lys
>WENV170041633
CDYT01018071
17323
Bacteroidota
GGA
Ser
>WENV170041644
CDYT01018319
235129
Bacteroidota
GCC
Gly
>WENV170041646
CDYT01018350
235129
Bacteroidota
GCC
Gly
>WENV170041648
CDYT01018400
48914
Bacteroidota
TGA
Ser
>WENV170041652
CDYT01018625
338132
Bacteroidota
GCA
Cys
>WENV170041661
CDYT01019114
80614
Bacteroidota
>WENV170041674
CDYT01019398
80614
Bacteroidota
>WENV170041705
CDYT01020266
235129
Bacteroidota
GCC
Gly
>WENV170041703
CDYT01020266
235129
Bacteroidota
GCC
Gly
>WENV170041701
CDYT01020266
235129
Bacteroidota
GCC
Gly
>WENV170041706
CDYT01020267
338125
Bacteroidota
CCT
Arg
>WENV170041715
CDYT01021227
23696
Bacteroidota
GCT
Ser
>WENV170041720
CDYT01021373
80614
Bacteroidota
>WENV170041721
CDYT01021373
185921
Bacteroidota
GTC
Asp
>WENV170041726
CDYT01021383
267954
Bacteroidota
GCC
Gly
>WENV170041727
CDYT01021624
185921
Bacteroidota
GTC
Asp
>WENV170041737
CDYT01021973
20893
Bacteroidota
GGA
Ser
>WENV170041751
CDYT01022262
144657
Bacteroidota
CGG
Pro
>WENV170041759
CDYT01022772
16224
Bacteroidota
GGA
Ser
>WENV170041766
CDYT01022888
52358
Bacteroidota
TGA
Ser
>WENV170041784
CDYT01023122
301449
Bacteroidota
CGG
Pro
>WENV170041786
CDYT01023209
16999
Bacteroidota
GGA
Ser
>WENV170041796
CDYT01023563
235129
Bacteroidota
GCC
Gly
>WENV170041809
CDYT01024484
150485
Bacteroidota
GTT
Asn
>WENV170041808
CDYT01024484
150485
Bacteroidota
GTT
Asn
>WENV170041807
CDYT01024484
150485
Bacteroidota
GTT
Asn
>WENV170041827
CDYT01025596
243025
Bacteroidota
CAT
Met
>WENV170041829
CDYT01025663
425638
Bacteroidota
CTG
Gln
>WENV170041853
CDYT01026503
338486
Bacteroidota
CAT
Met
>WENV170041863
CDYT01026821
52358
Bacteroidota
TGA
Ser
>WENV170041866
CDYT01027107
243025
Bacteroidota
CAT
Met
>WENV170041871
CDYT01027414
415410
Bacteroidota
TTG
Gln
>WENV170041878
CDYT01027743
338132
Bacteroidota
GCA
Cys
>WENV170041888
CDYT01027756
144596
Bacteroidota
GGC
Ala
>WENV170041890
CDYT01027765
301449
Bacteroidota
CGG
Pro
>WENV170041893
CDYT01027851
147439
Bacteroidota
TCT
Arg
>WENV170041910
CDYT01028350
58715
Bacteroidota
GAG
Leu
>WENV170041912
CDYT01028370
144933
Bacteroidota
TCT
Arg
>WENV170041920
CDYT01028376
113604
Bacteroidota
>WENV170041918
CDYT01028376
113604
Bacteroidota
>WENV170041923
CDYT01028413
48053
Bacteroidota
TGA
Ser
>WENV170041934
CDYT01028684
185921
Bacteroidota
GTC
Asp
>WENV170041938
CDYT01029137
425638
Bacteroidota
CTG
Gln
>WENV170041947
CDYT01029545
235102
Bacteroidota
CGT
Thr
>WENV170041948
CDYT01029564
267954
Bacteroidota
GCC
Gly
>WENV170041967
CDYT01029918
338124
Bacteroidota
CCG
Arg
>WENV170041974
CDYT01030400
144596
Bacteroidota
GGC
Ala
>WENV170041977
CDYT01030434
301449
Bacteroidota
CGG
Pro
>WENV170041991
CDYT01031191
240012
Bacteroidota
CCC
Gly
>WENV170042035
CDYT01032421
415410
Bacteroidota
TTG
Gln
>WENV170042045
CDYT01032989
235097
Bacteroidota
TTT
Lys
>WENV170042048
CDYT01032999
425638
Bacteroidota
CTG
Gln
>WENV170042062
CDYT01033594
235097
Bacteroidota
TTT
Lys
>WENV170042064
CDYT01033851
52358
Bacteroidota
TGA
Ser
>WENV170042076
CDYT01034393
23696
Bacteroidota
GCT
Ser
>WENV170042086
CDYT01034718
113604
Bacteroidota
>WENV170042084
CDYT01034718
113604
Bacteroidota
>WENV170042094
CDYT01035022
235203
Bacteroidota
TTT
Lys
>WENV170042098
CDYT01035154
144656
Bacteroidota
GTG
His
>WENV170042104
CDYT01035331
80607
Bacteroidota
GTA
Tyr
>WENV170042106
CDYT01035334
415410
Bacteroidota
TTG
Gln
>WENV170042111
CDYT01035614
338132
Bacteroidota
GCA
Cys
>WENV170042130
CDYT01036223
344692
Bacteroidota
GGT
Thr
>WENV170042125
CDYT01036223
132360
Bacteroidota
GGG
Pro
>WENV170042134
CDYT01036382
301449
Bacteroidota
CGG
Pro
>WENV170042147
CDYT01036683
151960
Bacteroidota
GGC
Ala
>WENV170042148
CDYT01036684
338132
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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