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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170244065
CEQO01286910
238010
Alphaproteobacteria
TTT
Lys
>WENV170242453
CEQO01057964
23468
Alphaproteobacteria
GCT
Ser
>WENV170241733
CEQO01004897
282595
Alphaproteobacteria
CCA
Trp
>WENV170243124
CEQO01121845
339724
Alphaproteobacteria
TTG
Gln
>WENV170242806
CEQO01086623
338282
Alphaproteobacteria
GTT
Asn
>WENV170243698
CEQO01185889
16408
Alphaproteobacteria
GGA
Ser
>WENV170243869
CEQO01245350
147577
Alphaproteobacteria
CCG
Arg
>WENV170243322
CEQO01142075
162801
Alphaproteobacteria
GTG
His
>WENV170242695
CEQO01076743
283763
Alphaproteobacteria
TGC
Ala
>WENV170243383
CEQO01146900
27877
Alphaproteobacteria
GGA
Ser
>WENV170242886
CEQO01095920
294226
Alphaproteobacteria
>WENV170242874
CEQO01094780
192195
Alphaproteobacteria
GTC
Asp
>WENV170242152
CEQO01034012
258175
Alphaproteobacteria
CGC
Ala
>WENV170242051
CEQO01028042
167926
Alphaproteobacteria
CAT
Met
>WENV170241840
CEQO01013221
167926
Alphaproteobacteria
CAT
Met
>WENV170243004
CEQO01106689
359842
Alphaproteobacteria
GAC
Val
>WENV170242217
CEQO01039079
359842
Alphaproteobacteria
GAC
Val
>WENV170242322
CEQO01047557
65244
Alphaproteobacteria
CAG
Leu
>WENV170243105
CEQO01120008
163860
Alphaproteobacteria
GGG
Pro
>WENV170243796
CEQO01220553
369678
Alphaproteobacteria
GGT
Thr
>WENV170243714
CEQO01190627
147289
Alphaproteobacteria
GTC
Asp
>WENV170242245
CEQO01042658
377327
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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