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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170243124
CEQO01121845
369984
Alphaproteobacteria
TTG
Gln
>WENV170242154
CEQO01034485
396582
Alphaproteobacteria
GAC
Val
>WENV170241713
CEQO01003689
114135
Alphaproteobacteria
GTA
Tyr
>WENV170242193
CEQO01036970
159552
Alphaproteobacteria
TGG
Pro
>WENV170243796
CEQO01220553
383286
Alphaproteobacteria
GGT
Thr
>WENV170243675
CEQO01176622
462157
Alphaproteobacteria
TCC
Gly
>WENV170242453
CEQO01057964
32122
Alphaproteobacteria
GCT
Ser
>WENV170244065
CEQO01286910
292580
Alphaproteobacteria
TTT
Lys
>WENV170243141
CEQO01123589
406362
Alphaproteobacteria
GAA
Phe
>WENV170243714
CEQO01190627
160197
Alphaproteobacteria
GTC
Asp
>WENV170243052
CEQO01113978
166599
Alphaproteobacteria
CAT
Met
>WENV170242217
CEQO01039079
377113
Alphaproteobacteria
GAC
Val
>WENV170243004
CEQO01106689
377113
Alphaproteobacteria
GAC
Val
>WENV170242703
CEQO01077163
326062
Alphaproteobacteria
TGC
Ala
>WENV170243383
CEQO01146900
29052
Alphaproteobacteria
GGA
Ser
>WENV170243105
CEQO01120008
178940
Alphaproteobacteria
GGG
Pro
>WENV170242458
CEQO01058539
323860
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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