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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170344138
CETE01070665
306070
Alphaproteobacteria
CCA
Trp
>WENV170343504
CETE01014885
113700
Alphaproteobacteria
>WENV170344105
CETE01066218
113700
Alphaproteobacteria
>WENV170344331
CETE01091314
23468
Alphaproteobacteria
GCT
Ser
>WENV170344440
CETE01104896
176908
Alphaproteobacteria
GTC
Asp
>WENV170344588
CETE01119140
282595
Alphaproteobacteria
CCA
Trp
>WENV170343976
CETE01053605
23561
Alphaproteobacteria
GGA
Ser
>WENV170344301
CETE01088982
338282
Alphaproteobacteria
GTT
Asn
>WENV170344373
CETE01097179
200119
Alphaproteobacteria
CAT
Met
>WENV170343655
CETE01025616
339722
Alphaproteobacteria
TTG
Gln
>WENV170344730
CETE01131326
283763
Alphaproteobacteria
TGC
Ala
>WENV170344459
CETE01105752
258175
Alphaproteobacteria
CGC
Ala
>WENV170344346
CETE01093469
167926
Alphaproteobacteria
CAT
Met
>WENV170343379
CETE01004090
161002
Alphaproteobacteria
GTG
His
>WENV170344363
CETE01095657
348781
Alphaproteobacteria
GAA
Phe
>WENV170344096
CETE01065712
279830
Alphaproteobacteria
TAC
Val
>WENV170344937
CETE01151383
339606
Alphaproteobacteria
>WENV170343670
CETE01027352
377327
Alphaproteobacteria
GCC
Gly
>WENV170344067
CETE01063062
388882
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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