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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170347625
CETG01151811
365250
Alphaproteobacteria
GCC
Gly
>WENV170347726
CETG01159379
241021
Alphaproteobacteria
GGC
Ala
>WENV170347489
CETG01140172
113700
Alphaproteobacteria
>WENV170347601
CETG01149490
113700
Alphaproteobacteria
>WENV170347097
CETG01099468
176908
Alphaproteobacteria
GTC
Asp
>WENV170346240
CETG01023269
421153
Alphaproteobacteria
>WENV170347060
CETG01096723
23561
Alphaproteobacteria
GGA
Ser
>WENV170348709
CETG01383981
339723
Alphaproteobacteria
>WENV170347342
CETG01126810
16408
Alphaproteobacteria
GGA
Ser
>WENV170346921
CETG01080867
162801
Alphaproteobacteria
GTG
His
>WENV170346901
CETG01079288
162801
Alphaproteobacteria
GTG
His
>WENV170348643
CETG01354185
237740
Alphaproteobacteria
TTT
Lys
>WENV170346740
CETG01064375
113716
Alphaproteobacteria
CAA
Leu
>WENV170348774
CETG01404545
194755
Alphaproteobacteria
CAT
Met
>WENV170348456
CETG01269395
147287
Alphaproteobacteria
TGG
Pro
>WENV170348544
CETG01319095
148158
Alphaproteobacteria
ACG
Arg
>WENV170348460
CETG01271067
339725
Alphaproteobacteria
GAA
Phe
>WENV170345976
CETG01004892
192195
Alphaproteobacteria
GTC
Asp
>WENV170347194
CETG01111574
167926
Alphaproteobacteria
CAT
Met
>WENV170346940
CETG01082702
167926
Alphaproteobacteria
CAT
Met
>WENV170348496
CETG01296401
364533
Alphaproteobacteria
GCC
Gly
>WENV170347143
CETG01104527
412477
Alphaproteobacteria
GCA
Cys
>WENV170348159
CETG01186049
412281
Alphaproteobacteria
CTG
Gln
>WENV170347531
CETG01144879
369678
Alphaproteobacteria
GGT
Thr
>WENV170347440
CETG01135083
235430
Alphaproteobacteria
TTT
Lys
>WENV170347813
CETG01164414
339609
Alphaproteobacteria
GGT
Thr
>WENV170346836
CETG01074305
113715
Alphaproteobacteria
TAG
Leu
>WENV170346205
CETG01021030
174413
Alphaproteobacteria
CAT
Met
>WENV170347154
CETG01106106
377327
Alphaproteobacteria
GCC
Gly
>WENV170347192
CETG01111243
243633
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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