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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170348159
CETG01186049
448544
Alphaproteobacteria
CTG
Gln
>WENV170347689
CETG01156930
396582
Alphaproteobacteria
GAC
Val
>WENV170346206
CETG01021030
160201
Alphaproteobacteria
TGG
Pro
>WENV170348715
CETG01387040
166628
Alphaproteobacteria
CAT
Met
>WENV170348131
CETG01184432
201858
Alphaproteobacteria
CCT
Arg
>WENV170348460
CETG01271067
369985
Alphaproteobacteria
GAA
Phe
>WENV170348456
CETG01269395
169712
Alphaproteobacteria
TGG
Pro
>WENV170347531
CETG01144879
383286
Alphaproteobacteria
GGT
Thr
>WENV170346240
CETG01023269
448545
Alphaproteobacteria
>WENV170348496
CETG01296401
382620
Alphaproteobacteria
GCC
Gly
>WENV170346520
CETG01047140
93190
Alphaproteobacteria
CAA
Leu
>WENV170347609
CETG01150111
107829
Alphaproteobacteria
CAA
Leu
>WENV170346936
CETG01082302
203353
Alphaproteobacteria
CAT
Met
>WENV170347601
CETG01149490
124623
Alphaproteobacteria
>WENV170347060
CETG01096723
26352
Alphaproteobacteria
GGA
Ser
>WENV170348787
CETG01408870
161060
Alphaproteobacteria
ACG
Arg
>WENV170348544
CETG01319095
159474
Alphaproteobacteria
ACG
Arg
>WENV170348709
CETG01383981
369406
Alphaproteobacteria
GAC
Val
>WENV170346901
CETG01079288
238723
Alphaproteobacteria
GTG
His
>WENV170346921
CETG01080867
238723
Alphaproteobacteria
GTG
His
>WENV170347778
CETG01162001
67024
Alphaproteobacteria
TAA
Leu
>WENV170348719
CETG01388412
263499
Alphaproteobacteria
CGT
Thr
>WENV170347212
CETG01113647
205335
Alphaproteobacteria
GGG
Pro
>WENV170347756
CETG01160973
307687
Alphaproteobacteria
GGC
Ala
>WENV170346740
CETG01064375
129121
Alphaproteobacteria
CAA
Leu
>WENV170348725
CETG01390464
105419
Alphaproteobacteria
TAA
Leu
>WENV170346558
CETG01049631
26306
Alphaproteobacteria
TGA
Ser
>WENV170347143
CETG01104527
449739
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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