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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170439842
CEUV01054367
149985
Alphaproteobacteria
ACG
Arg
>WENV170438973
CEUV01005774
147089
Alphaproteobacteria
ACG
Arg
>WENV170439084
CEUV01011045
147089
Alphaproteobacteria
ACG
Arg
>WENV170439395
CEUV01029569
113700
Alphaproteobacteria
>WENV170439599
CEUV01041223
176908
Alphaproteobacteria
GTC
Asp
>WENV170440373
CEUV01093153
176908
Alphaproteobacteria
GTC
Asp
>WENV170438917
CEUV01002600
282595
Alphaproteobacteria
CCA
Trp
>WENV170439006
CEUV01007586
338282
Alphaproteobacteria
GTT
Asn
>WENV170439109
CEUV01012829
338282
Alphaproteobacteria
GTT
Asn
>WENV170440477
CEUV01101616
338282
Alphaproteobacteria
GTT
Asn
>WENV170441577
CEUV01225784
95928
Alphaproteobacteria
TAG
Leu
>WENV170441861
CEUV01294691
339722
Alphaproteobacteria
TTG
Gln
>WENV170441511
CEUV01192883
235492
Alphaproteobacteria
GAA
Phe
>WENV170441085
CEUV01147434
235492
Alphaproteobacteria
GAA
Phe
>WENV170439170
CEUV01015650
276379
Alphaproteobacteria
TGC
Ala
>WENV170441566
CEUV01219081
96640
Alphaproteobacteria
CAA
Leu
>WENV170439663
CEUV01045455
192195
Alphaproteobacteria
GTC
Asp
>WENV170439078
CEUV01010883
378976
Alphaproteobacteria
GAC
Val
>WENV170439631
CEUV01043550
23672
Alphaproteobacteria
GCT
Ser
>WENV170439321
CEUV01025607
167926
Alphaproteobacteria
CAT
Met
>WENV170439097
CEUV01011931
161002
Alphaproteobacteria
GTG
His
>WENV170441569
CEUV01219282
412281
Alphaproteobacteria
CTG
Gln
>WENV170440570
CEUV01111769
266073
Alphaproteobacteria
TTT
Lys
>WENV170439289
CEUV01023375
369678
Alphaproteobacteria
GGT
Thr
>WENV170440668
CEUV01119849
154227
Alphaproteobacteria
CAT
Met
>WENV170441463
CEUV01168787
412424
Alphaproteobacteria
TCC
Gly
>WENV170439060
CEUV01010125
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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