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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170537972
CEWR01042503
117444
Bacteroidota
GTA
Tyr
>WENV170539176
CEWR01154189
292540
Bacteroidota
TCC
Gly
>WENV170538687
CEWR01106503
257688
Bacteroidota
>WENV170538461
CEWR01082255
105453
Bacteroidota
TAG
Leu
>WENV170538482
CEWR01085422
213847
Bacteroidota
GTT
Asn
>WENV170539196
CEWR01155250
213847
Bacteroidota
GTT
Asn
>WENV170537349
CEWR01000847
106764
Bacteroidota
GTA
Tyr
>WENV170538853
CEWR01126050
161477
Bacteroidota
CAT
Met
>WENV170538284
CEWR01066788
258741
Bacteroidota
TCC
Gly
>WENV170538984
CEWR01140406
258741
Bacteroidota
TCC
Gly
>WENV170539295
CEWR01159546
258741
Bacteroidota
TCC
Gly
>WENV170538131
CEWR01056239
300555
Bacteroidota
CCA
Trp
>WENV170537363
CEWR01001692
314601
Bacteroidota
>WENV170539065
CEWR01146789
314601
Bacteroidota
>WENV170539787
CEWR01293153
266737
Bacteroidota
TTT
Lys
>WENV170538917
CEWR01132698
139505
Bacteroidota
TAC
Val
>WENV170538542
CEWR01091200
258742
Bacteroidota
TTT
Lys
>WENV170537732
CEWR01025671
258742
Bacteroidota
TTT
Lys
>WENV170538221
CEWR01062495
258742
Bacteroidota
TTT
Lys
>WENV170538398
CEWR01077251
258742
Bacteroidota
TTT
Lys
>WENV170539015
CEWR01143186
258742
Bacteroidota
TTT
Lys
>WENV170537697
CEWR01022854
116954
Bacteroidota
TAG
Leu
>WENV170539743
CEWR01289616
268924
Bacteroidota
TTT
Lys
>WENV170538160
CEWR01058099
188934
Bacteroidota
>WENV170539506
CEWR01237305
139484
Bacteroidota
TAC
Val
>WENV170539744
CEWR01289616
67040
Bacteroidota
GAG
Leu
>WENV170537576
CEWR01015369
57357
Bacteroidota
TGA
Ser
>WENV170538463
CEWR01082773
57357
Bacteroidota
TGA
Ser
>WENV170537384
CEWR01003200
448470
Bacteroidota
GCA
Cys
>WENV170538800
CEWR01120344
258133
Bacteroidota
>WENV170537613
CEWR01018232
108836
Bacteroidota
GCT
Ser
>WENV170538040
CEWR01047415
385890
Bacteroidota
TTC
Glu
>WENV170539292
CEWR01159421
448301
Bacteroidota
>WENV170538966
CEWR01138244
310696
Bacteroidota
CCA
Trp
>WENV170538114
CEWR01055364
21418
Bacteroidota
GGA
Ser
>WENV170539543
CEWR01248385
229004
Bacteroidota
GGC
Ala
>WENV170537907
CEWR01038272
300647
Bacteroidota
TTT
Lys
>WENV170537917
CEWR01038756
153255
Bacteroidota
TGG
Pro
>WENV170539212
CEWR01156307
263627
Bacteroidota
TTG
Gln
>WENV170537725
CEWR01025004
149589
Bacteroidota
TAC
Val
>WENV170537696
CEWR01022854
177164
Bacteroidota
GTC
Asp
>WENV170539609
CEWR01268426
370675
Bacteroidota
TTC
Glu
>WENV170538116
CEWR01055378
223232
Bacteroidota
>WENV170537583
CEWR01015974
138967
Bacteroidota
TGG
Pro
>WENV170537984
CEWR01043153
138967
Bacteroidota
TGG
Pro
>WENV170537656
CEWR01020064
257687
Bacteroidota
TTT
Lys
>WENV170538701
CEWR01107601
51032
Bacteroidota
TGA
Ser
>WENV170537883
CEWR01036426
164620
Bacteroidota
GTG
His
>WENV170538413
CEWR01079195
321470
Bacteroidota
GAA
Phe
>WENV170539289
CEWR01159380
267059
Bacteroidota
GAA
Phe
>WENV170539184
CEWR01154571
241430
Bacteroidota
GGC
Ala
>WENV170539707
CEWR01285251
370083
Bacteroidota
TTC
Glu
>WENV170537520
CEWR01011733
369841
Bacteroidota
>WENV170538052
CEWR01049374
71400
Bacteroidota
GCT
Ser
>WENV170539270
CEWR01158849
24600
Bacteroidota
GGA
Ser
>WENV170538112
CEWR01054978
412268
Bacteroidota
CCA
Trp
>WENV170538910
CEWR01131919
412268
Bacteroidota
CCA
Trp
>WENV170539262
CEWR01158593
213501
Bacteroidota
GTC
Asp
>WENV170538076
CEWR01051370
310118
Bacteroidota
CCA
Trp
>WENV170538191
CEWR01060131
310118
Bacteroidota
CCA
Trp
>WENV170537621
CEWR01018980
114734
Bacteroidota
TAG
Leu
>WENV170539073
CEWR01147605
114734
Bacteroidota
TAG
Leu
>WENV170539101
CEWR01149529
114734
Bacteroidota
TAG
Leu
>WENV170539144
CEWR01153350
174954
Bacteroidota
GTT
Asn
>WENV170538031
CEWR01047068
149057
Bacteroidota
TAC
Val
>WENV170539261
CEWR01158534
149057
Bacteroidota
TAC
Val
>WENV170537545
CEWR01013008
369215
Bacteroidota
TTC
Glu
>WENV170538322
CEWR01069764
111503
Bacteroidota
CAA
Leu
>WENV170539028
CEWR01144163
111503
Bacteroidota
CAA
Leu
>WENV170537476
CEWR01009261
398998
Bacteroidota
GCC
Gly
>WENV170538520
CEWR01088833
158985
Bacteroidota
GTC
Asp
>WENV170539741
CEWR01288994
158985
Bacteroidota
GTC
Asp
>WENV170537726
CEWR01025236
325477
Bacteroidota
TTG
Gln
>WENV170539291
CEWR01159420
179763
Bacteroidota
GTG
His
>WENV170539279
CEWR01158899
172819
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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