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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170538810
CEWR01121682
146962
Bacteroidota
CAT
Met
>WENV170539787
CEWR01293153
236929
Bacteroidota
TTT
Lys
>WENV170539255
CEWR01158411
163866
Bacteroidota
TCG
Arg
>WENV170537917
CEWR01038756
126691
Bacteroidota
TGG
Pro
>WENV170539184
CEWR01154571
187493
Bacteroidota
GGC
Ala
>WENV170538520
CEWR01088833
172532
Bacteroidota
GTC
Asp
>WENV170539741
CEWR01288994
172532
Bacteroidota
GTC
Asp
>WENV170539785
CEWR01292948
103881
Bacteroidota
TAG
Leu
>WENV170539295
CEWR01159546
243344
Bacteroidota
TCC
Gly
>WENV170538984
CEWR01140406
243344
Bacteroidota
TCC
Gly
>WENV170538284
CEWR01066788
243344
Bacteroidota
TCC
Gly
>WENV170539101
CEWR01149529
100198
Bacteroidota
TAG
Leu
>WENV170539073
CEWR01147605
100198
Bacteroidota
TAG
Leu
>WENV170538461
CEWR01082255
100198
Bacteroidota
TAG
Leu
>WENV170537621
CEWR01018980
100198
Bacteroidota
TAG
Leu
>WENV170539149
CEWR01153710
338625
Bacteroidota
TTC
Glu
>WENV170538930
CEWR01134396
364423
Bacteroidota
GGT
Thr
>WENV170538052
CEWR01049374
60611
Bacteroidota
GCT
Ser
>WENV170539609
CEWR01268426
338568
Bacteroidota
TTC
Glu
>WENV170537349
CEWR01000847
96418
Bacteroidota
GTA
Tyr
>WENV170539743
CEWR01289616
235936
Bacteroidota
TTT
Lys
>WENV170537984
CEWR01043153
127288
Bacteroidota
TGG
Pro
>WENV170537583
CEWR01015974
127288
Bacteroidota
TGG
Pro
>WENV170537384
CEWR01003200
412944
Bacteroidota
GCA
Cys
>WENV170539289
CEWR01159380
238764
Bacteroidota
>WENV170539210
CEWR01156240
238764
Bacteroidota
>WENV170539203
CEWR01155600
238764
Bacteroidota
>WENV170539198
CEWR01155320
238764
Bacteroidota
>WENV170539023
CEWR01143600
238764
Bacteroidota
>WENV170537476
CEWR01009261
341598
Bacteroidota
GCC
Gly
>WENV170537726
CEWR01025236
274593
Bacteroidota
TTG
Gln
>WENV170538779
CEWR01117968
343033
Bacteroidota
TTC
Glu
>WENV170539270
CEWR01158849
17987
Bacteroidota
GGA
Ser
>WENV170539065
CEWR01146789
235802
Bacteroidota
CAT
Met
>WENV170538687
CEWR01106503
235802
Bacteroidota
CAT
Met
>WENV170537363
CEWR01001692
235802
Bacteroidota
CAT
Met
>WENV170537520
CEWR01011733
341187
Bacteroidota
TTG
Gln
>WENV170538910
CEWR01131919
341421
Bacteroidota
CCA
Trp
>WENV170538112
CEWR01054978
341421
Bacteroidota
CCA
Trp
>WENV170537957
CEWR01040837
145512
Bacteroidota
CAT
Met
>WENV170538043
CEWR01047743
150454
Bacteroidota
TGT
Thr
>WENV170537985
CEWR01043153
150454
Bacteroidota
TGT
Thr
>WENV170537510
CEWR01010826
150454
Bacteroidota
TGT
Thr
>WENV170538390
CEWR01076510
145555
Bacteroidota
GTC
Asp
>WENV170538389
CEWR01076510
145555
Bacteroidota
GTC
Asp
>WENV170537818
CEWR01030864
145555
Bacteroidota
GTC
Asp
>WENV170537655
CEWR01020064
145555
Bacteroidota
GTC
Asp
>WENV170537654
CEWR01020064
145555
Bacteroidota
GTC
Asp
>WENV170537545
CEWR01013008
341465
Bacteroidota
TTC
Glu
>WENV170537696
CEWR01022854
185921
Bacteroidota
GTC
Asp
>WENV170538800
CEWR01120344
255845
Bacteroidota
>WENV170537576
CEWR01015369
48382
Bacteroidota
TGA
Ser
>WENV170538647
CEWR01100860
127382
Bacteroidota
TAC
Val
>WENV170537725
CEWR01025004
127382
Bacteroidota
TAC
Val
>WENV170539262
CEWR01158593
145405
Bacteroidota
GTC
Asp
>WENV170538917
CEWR01132698
127449
Bacteroidota
TAC
Val
>WENV170537972
CEWR01042503
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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