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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170567815
FLMP01006287
238010
Alphaproteobacteria
TTT
Lys
>WENV170568235
FLMP01023702
306070
Alphaproteobacteria
CCA
Trp
>WENV170568283
FLMP01027465
306070
Alphaproteobacteria
CCA
Trp
>WENV170569409
FLMP01198979
306070
Alphaproteobacteria
CCA
Trp
>WENV170569509
FLMP01220190
306070
Alphaproteobacteria
CCA
Trp
>WENV170567532
FLMP01001568
241021
Alphaproteobacteria
GGC
Ala
>WENV170567470
FLMP01000757
113700
Alphaproteobacteria
>WENV170567669
FLMP01003353
113700
Alphaproteobacteria
>WENV170568135
FLMP01019015
113700
Alphaproteobacteria
>WENV170568600
FLMP01054206
113700
Alphaproteobacteria
>WENV170567857
FLMP01007630
109657
Alphaproteobacteria
TAG
Leu
>WENV170568143
FLMP01019245
176908
Alphaproteobacteria
GTC
Asp
>WENV170568829
FLMP01084526
23671
Alphaproteobacteria
CGA
Ser
>WENV170570335
FLMP01529198
338282
Alphaproteobacteria
GTT
Asn
>WENV170568634
FLMP01058036
338282
Alphaproteobacteria
GTT
Asn
>WENV170567965
FLMP01011249
338282
Alphaproteobacteria
GTT
Asn
>WENV170567482
FLMP01000888
338282
Alphaproteobacteria
GTT
Asn
>WENV170568033
FLMP01013832
147083
Alphaproteobacteria
GGG
Pro
>WENV170567593
FLMP01002188
147879
Alphaproteobacteria
TGG
Pro
>WENV170569471
FLMP01211875
147334
Alphaproteobacteria
CAT
Met
>WENV170568087
FLMP01016742
28682
Alphaproteobacteria
GGA
Ser
>WENV170569704
FLMP01275901
340106
Alphaproteobacteria
GCC
Gly
>WENV170569510
FLMP01220190
340106
Alphaproteobacteria
GCC
Gly
>WENV170569286
FLMP01162887
340106
Alphaproteobacteria
GCC
Gly
>WENV170568874
FLMP01090740
340106
Alphaproteobacteria
GCC
Gly
>WENV170567469
FLMP01000757
340106
Alphaproteobacteria
GCC
Gly
>WENV170568966
FLMP01103064
161002
Alphaproteobacteria
GTG
His
>WENV170568651
FLMP01060630
163860
Alphaproteobacteria
GGG
Pro
>WENV170569547
FLMP01227456
319925
Alphaproteobacteria
TGT
Thr
>WENV170568493
FLMP01044461
319925
Alphaproteobacteria
TGT
Thr
>WENV170567770
FLMP01005135
319925
Alphaproteobacteria
TGT
Thr
>WENV170570156
FLMP01438948
154227
Alphaproteobacteria
CAT
Met
>WENV170567586
FLMP01002112
154227
Alphaproteobacteria
CAT
Met
>WENV170568095
FLMP01016942
412424
Alphaproteobacteria
TCC
Gly
>WENV170568064
FLMP01015185
412424
Alphaproteobacteria
TCC
Gly
>WENV170569205
FLMP01146987
113715
Alphaproteobacteria
TAG
Leu
>WENV170568397
FLMP01036538
113715
Alphaproteobacteria
TAG
Leu
>WENV170570291
FLMP01502363
236256
Alphaproteobacteria
TAC
Val
>WENV170567327
FLMP01000031
236256
Alphaproteobacteria
TAC
Val
>WENV170569998
FLMP01380079
193837
Alphaproteobacteria
CAT
Met
>WENV170569783
FLMP01301912
237574
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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