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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170567961
FLMP01011143
166573
Alphaproteobacteria
CAT
Met
>WENV170570175
FLMP01451365
124622
Alphaproteobacteria
CAA
Leu
>WENV170567909
FLMP01009519
275643
Alphaproteobacteria
TTT
Lys
>WENV170569307
FLMP01165304
396582
Alphaproteobacteria
GAC
Val
>WENV170569166
FLMP01139414
380306
Alphaproteobacteria
GGT
Thr
>WENV170568235
FLMP01023702
259585
Alphaproteobacteria
CCA
Trp
>WENV170568283
FLMP01027465
259585
Alphaproteobacteria
CCA
Trp
>WENV170569509
FLMP01220190
259585
Alphaproteobacteria
CCA
Trp
>WENV170568513
FLMP01045943
32838
Alphaproteobacteria
GCT
Ser
>WENV170568305
FLMP01028742
89072
Alphaproteobacteria
GAG
Leu
>WENV170570142
FLMP01434873
89072
Alphaproteobacteria
GAG
Leu
>WENV170569006
FLMP01106977
392647
Alphaproteobacteria
GGT
Thr
>WENV170568081
FLMP01016147
393349
Alphaproteobacteria
GGT
Thr
>WENV170567815
FLMP01006287
292580
Alphaproteobacteria
TTT
Lys
>WENV170567343
FLMP01000049
406362
Alphaproteobacteria
GAA
Phe
>WENV170567439
FLMP01000552
406362
Alphaproteobacteria
GAA
Phe
>WENV170567922
FLMP01010166
406362
Alphaproteobacteria
GAA
Phe
>WENV170570086
FLMP01413819
406362
Alphaproteobacteria
GAA
Phe
>WENV170567857
FLMP01007630
114680
Alphaproteobacteria
TAG
Leu
>WENV170567512
FLMP01001339
26376
Alphaproteobacteria
GCT
Ser
>WENV170569218
FLMP01150182
114633
Alphaproteobacteria
TAG
Leu
>WENV170570327
FLMP01525737
114633
Alphaproteobacteria
TAG
Leu
>WENV170568111
FLMP01017771
391194
Alphaproteobacteria
GGT
Thr
>WENV170567469
FLMP01000757
406246
Alphaproteobacteria
GCC
Gly
>WENV170568874
FLMP01090740
406246
Alphaproteobacteria
GCC
Gly
>WENV170569286
FLMP01162887
406246
Alphaproteobacteria
GCC
Gly
>WENV170569510
FLMP01220190
406246
Alphaproteobacteria
GCC
Gly
>WENV170569704
FLMP01275901
406246
Alphaproteobacteria
GCC
Gly
>WENV170569886
FLMP01342084
374019
Alphaproteobacteria
GAC
Val
>WENV170568595
FLMP01053908
76380
Alphaproteobacteria
GAG
Leu
>WENV170567831
FLMP01006592
377113
Alphaproteobacteria
GAC
Val
>WENV170568966
FLMP01103064
207103
Alphaproteobacteria
GTG
His
>WENV170567377
FLMP01000156
205335
Alphaproteobacteria
GGG
Pro
>WENV170568180
FLMP01021298
167092
Alphaproteobacteria
GAT
Ile
>WENV170568841
FLMP01086002
372766
Alphaproteobacteria
TTG
Gln
>WENV170569020
FLMP01110189
371034
Alphaproteobacteria
GAC
Val
>WENV170570001
FLMP01383405
371034
Alphaproteobacteria
GAC
Val
>WENV170568155
FLMP01019722
171839
Alphaproteobacteria
TGG
Pro
>WENV170567466
FLMP01000738
209273
Alphaproteobacteria
GTG
His
>WENV170569049
FLMP01114281
209273
Alphaproteobacteria
GTG
His
>WENV170568651
FLMP01060630
178940
Alphaproteobacteria
GGG
Pro
>WENV170568829
FLMP01084526
26236
Alphaproteobacteria
CGA
Ser
>WENV170568798
FLMP01080243
231929
Alphaproteobacteria
ACG
Arg
>WENV170567998
FLMP01012542
377404
Alphaproteobacteria
GAC
Val
>WENV170569937
FLMP01358702
377404
Alphaproteobacteria
GAC
Val
>WENV170569531
FLMP01224829
323860
Alphaproteobacteria
CCA
Trp
>WENV170567661
FLMP01003188
163583
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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