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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180014087
FPIC01049648
381459
Alphaproteobacteria
CAC
Val
>WENV180014038
FPIC01034385
155663
Alphaproteobacteria
CCG
Arg
>WENV180014328
FPIC01170961
59382
Alphaproteobacteria
CAG
Leu
>WENV180014104
FPIC01056229
34696
Alphaproteobacteria
GGA
Ser
>WENV180014127
FPIC01060558
113700
Alphaproteobacteria
>WENV180014233
FPIC01106516
23605
Alphaproteobacteria
CGA
Ser
>WENV180013920
FPIC01010466
338286
Alphaproteobacteria
TTG
Gln
>WENV180014167
FPIC01074972
338282
Alphaproteobacteria
GTT
Asn
>WENV180014239
FPIC01109449
147577
Alphaproteobacteria
CCG
Arg
>WENV180013866
FPIC01005494
339434
Alphaproteobacteria
CCC
Gly
>WENV180014058
FPIC01038840
23560
Alphaproteobacteria
CGA
Ser
>WENV180014121
FPIC01059334
338496
Alphaproteobacteria
CAT
Met
>WENV180014144
FPIC01067793
237740
Alphaproteobacteria
TTT
Lys
>WENV180014179
FPIC01078656
281594
Alphaproteobacteria
TGT
Thr
>WENV180014316
FPIC01163082
338757
Alphaproteobacteria
GAC
Val
>WENV180013889
FPIC01007296
146820
Alphaproteobacteria
CGG
Pro
>WENV180014129
FPIC01061675
413626
Alphaproteobacteria
TCC
Gly
>WENV180014298
FPIC01152340
153154
Alphaproteobacteria
TAC
Val
>WENV180014111
FPIC01056710
339432
Alphaproteobacteria
GTT
Asn
>WENV180014132
FPIC01062819
25533
Alphaproteobacteria
GGA
Ser
>WENV180014334
FPIC01176889
242540
Alphaproteobacteria
TGC
Ala
>WENV180014256
FPIC01117262
238730
Alphaproteobacteria
TTT
Lys
>WENV180014162
FPIC01072008
284043
Alphaproteobacteria
CGT
Thr
>WENV180014324
FPIC01169101
10642
Alphaproteobacteria
GCT
Ser
>WENV180014169
FPIC01075205
424918
Alphaproteobacteria
TCC
Gly
>WENV180014259
FPIC01118929
188632
Alphaproteobacteria
GAT
Ile
>WENV180014098
FPIC01055374
339436
Alphaproteobacteria
>WENV180014178
FPIC01078186
267554
Alphaproteobacteria
TGC
Ala
>WENV180013874
FPIC01006191
146817
Alphaproteobacteria
GTG
His
>WENV180014041
FPIC01035339
147286
Alphaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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