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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577487
FSSH01000063
146789
Gammaproteobacteria
TCT
Arg
>WENV170577659
FSSH01000444
236013
Gammaproteobacteria
TGC
Ala
>WENV170577661
FSSH01000469
236013
Gammaproteobacteria
TGC
Ala
>WENV170577640
FSSH01000340
46594
Gammaproteobacteria
GGA
Ser
>WENV170577531
FSSH01000120
237414
Gammaproteobacteria
CGT
Thr
>WENV170577734
FSSH01000684
237414
Gammaproteobacteria
CGT
Thr
>WENV170578150
FSSH01039892
373590
Gammaproteobacteria
TTG
Gln
>WENV170577589
FSSH01000240
237416
Gammaproteobacteria
TTT
Lys
>WENV170577581
FSSH01000226
113685
Gammaproteobacteria
TAG
Leu
>WENV170577486
FSSH01000063
146788
Gammaproteobacteria
TGG
Pro
>WENV170577899
FSSH01002527
146923
Gammaproteobacteria
TGG
Pro
>WENV170577808
FSSH01001429
249963
Gammaproteobacteria
GGT
Thr
>WENV170577937
FSSH01003444
95907
Gammaproteobacteria
GTA
Tyr
>WENV170577520
FSSH01000114
95907
Gammaproteobacteria
GTA
Tyr
>WENV170577582
FSSH01000226
237412
Gammaproteobacteria
TAC
Val
>WENV170577903
FSSH01002527
106361
Gammaproteobacteria
TAG
Leu
>WENV170577913
FSSH01002603
173040
Gammaproteobacteria
GAC
Val
>WENV170577686
FSSH01000527
173040
Gammaproteobacteria
GAC
Val
>WENV170577448
FSSH01000017
237418
Gammaproteobacteria
GTT
Asn
>WENV170577446
FSSH01000017
16374
Gammaproteobacteria
GCT
Ser
>WENV170578059
FSSH01008470
261213
Gammaproteobacteria
CAT
Met
>WENV170577503
FSSH01000091
95909
Gammaproteobacteria
GAG
Leu
>WENV170577992
FSSH01004876
45152
Gammaproteobacteria
GGA
Ser
>WENV170578144
FSSH01035784
144813
Gammaproteobacteria
CCT
Arg
>WENV170577959
FSSH01003770
146786
Gammaproteobacteria
CCG
Arg
>WENV170577489
FSSH01000063
146786
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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