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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577448
FSSH01000017
309075
Gammaproteobacteria
GTT
Asn
>WENV170577992
FSSH01004876
49893
Gammaproteobacteria
GGA
Ser
>WENV170577488
FSSH01000063
314433
Gammaproteobacteria
GTG
His
>WENV170577642
FSSH01000353
107307
Gammaproteobacteria
CAA
Leu
>WENV170577921
FSSH01003043
107307
Gammaproteobacteria
CAA
Leu
>WENV170577641
FSSH01000353
67015
Gammaproteobacteria
CAG
Leu
>WENV170577922
FSSH01003095
67015
Gammaproteobacteria
CAG
Leu
>WENV170577547
FSSH01000167
27828
Gammaproteobacteria
TGA
Ser
>WENV170577958
FSSH01003758
27828
Gammaproteobacteria
TGA
Ser
>WENV170577581
FSSH01000226
125235
Gammaproteobacteria
TAG
Leu
>WENV170577486
FSSH01000063
165369
Gammaproteobacteria
TGG
Pro
>WENV170577519
FSSH01000114
376213
Gammaproteobacteria
TTG
Gln
>WENV170577553
FSSH01000178
140664
Gammaproteobacteria
CAT
Met
>WENV170577589
FSSH01000240
306474
Gammaproteobacteria
TTT
Lys
>WENV170578144
FSSH01035784
158484
Gammaproteobacteria
CCT
Arg
>WENV170577536
FSSH01000128
451381
Gammaproteobacteria
GCA
Cys
>WENV170577522
FSSH01000114
323307
Gammaproteobacteria
GGT
Thr
>WENV170577939
FSSH01003444
323307
Gammaproteobacteria
GGT
Thr
>WENV170577487
FSSH01000063
190140
Gammaproteobacteria
TCT
Arg
>WENV170577447
FSSH01000017
215947
Gammaproteobacteria
ACG
Arg
>WENV170577687
FSSH01000527
178032
Gammaproteobacteria
GGG
Pro
>WENV170577503
FSSH01000091
107309
Gammaproteobacteria
GAG
Leu
>WENV170577903
FSSH01002527
121854
Gammaproteobacteria
TAG
Leu
>WENV170578150
FSSH01039892
399907
Gammaproteobacteria
TTG
Gln
>WENV170577463
FSSH01000033
169554
Gammaproteobacteria
CCT
Arg
>WENV170577695
FSSH01000553
169554
Gammaproteobacteria
CCT
Arg
>WENV170577546
FSSH01000167
67014
Gammaproteobacteria
TAA
Leu
>WENV170578052
FSSH01007892
88645
Gammaproteobacteria
CAA
Leu
>WENV170577446
FSSH01000017
19176
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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