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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016057
FSTY01000451
243559
Actinomycetota
TTT
Lys
>WENV180016073
FSTY01000704
243559
Actinomycetota
TTT
Lys
>WENV180016050
FSTY01000381
237877
Actinomycetota
CGT
Thr
>WENV180016058
FSTY01000460
237877
Actinomycetota
CGT
Thr
>WENV180016039
FSTY01000235
150727
Actinomycetota
GGG
Pro
>WENV180016059
FSTY01000489
150727
Actinomycetota
GGG
Pro
>WENV180016061
FSTY01000519
412084
Actinomycetota
CCC
Gly
>WENV180016054
FSTY01000416
339308
Actinomycetota
CTG
Gln
>WENV180016069
FSTY01000686
339308
Actinomycetota
CTG
Gln
>WENV180016052
FSTY01000410
236241
Actinomycetota
TAC
Val
>WENV180016048
FSTY01000358
412163
Actinomycetota
TCC
Gly
>WENV180016070
FSTY01000686
244362
Actinomycetota
CTC
Glu
>WENV180016055
FSTY01000416
244362
Actinomycetota
CTC
Glu
>WENV180016037
FSTY01000216
59196
Actinomycetota
CAG
Leu
>WENV180016042
FSTY01000291
237170
Actinomycetota
CTT
Lys
>WENV180016045
FSTY01000310
339525
Actinomycetota
GAC
Val
>WENV180016056
FSTY01000445
45081
Actinomycetota
GGA
Ser
>WENV180016051
FSTY01000395
152456
Actinomycetota
CAT
Met
>WENV180016038
FSTY01000230
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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