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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016064
FSTY01000592
167857
Actinomycetota
GGC
Ala
>WENV180016035
FSTY01000118
166451
Actinomycetota
>WENV180016031
FSTY01000044
158362
Actinomycetota
TGG
Pro
>WENV180016047
FSTY01000327
158362
Actinomycetota
TGG
Pro
>WENV180016028
FSTY01000007
256995
Actinomycetota
CGC
Ala
>WENV180016052
FSTY01000410
257001
Actinomycetota
TAC
Val
>WENV180016056
FSTY01000445
49729
Actinomycetota
GGA
Ser
>WENV180016055
FSTY01000416
260056
Actinomycetota
CTC
Glu
>WENV180016070
FSTY01000686
260056
Actinomycetota
CTC
Glu
>WENV180016043
FSTY01000305
376466
Actinomycetota
TTG
Gln
>WENV180016065
FSTY01000621
376466
Actinomycetota
TTG
Gln
>WENV180016041
FSTY01000290
267530
Actinomycetota
CTT
Lys
>WENV180016061
FSTY01000519
448022
Actinomycetota
CCC
Gly
>WENV180016054
FSTY01000416
369061
Actinomycetota
CTG
Gln
>WENV180016069
FSTY01000686
369061
Actinomycetota
CTG
Gln
>WENV180016045
FSTY01000310
369064
Actinomycetota
GAC
Val
>WENV180016044
FSTY01000310
448853
Actinomycetota
GCA
Cys
>WENV180016042
FSTY01000291
257476
Actinomycetota
CTT
Lys
>WENV180016036
FSTY01000125
370521
Actinomycetota
CCG
Arg
>WENV180016046
FSTY01000314
370521
Actinomycetota
CCG
Arg
>WENV180016072
FSTY01000698
370521
Actinomycetota
CCG
Arg
>WENV180016050
FSTY01000381
257378
Actinomycetota
CGT
Thr
>WENV180016058
FSTY01000460
257378
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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