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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180023941
FTIF01004723
238933
Actinomycetota
CTT
Lys
>WENV180023834
FTIF01001183
338763
Actinomycetota
GCC
Gly
>WENV180023971
FTIF01005321
338763
Actinomycetota
GCC
Gly
>WENV180024212
FTIF01269008
338763
Actinomycetota
GCC
Gly
>WENV180024201
FTIF01209514
174149
Actinomycetota
GAT
Ile
>WENV180023922
FTIF01004099
289919
Actinomycetota
GGC
Ala
>WENV180024099
FTIF01037312
146611
Actinomycetota
CGG
Pro
>WENV180024239
FTIF01349086
146607
Actinomycetota
GTC
Asp
>WENV180024116
FTIF01050752
47159
Actinomycetota
>WENV180024168
FTIF01111573
302210
Actinomycetota
TCT
Arg
>WENV180023871
FTIF01002608
302210
Actinomycetota
TCT
Arg
>WENV180023990
FTIF01006152
236241
Actinomycetota
TAC
Val
>WENV180023975
FTIF01005323
411983
Actinomycetota
TCC
Gly
>WENV180024238
FTIF01349086
237596
Actinomycetota
TTC
Glu
>WENV180024245
FTIF01349134
374962
Actinomycetota
CCT
Arg
>WENV180023759
FTIF01000083
374962
Actinomycetota
CCT
Arg
>WENV180024074
FTIF01025356
366330
Actinomycetota
CTG
Gln
>WENV180023899
FTIF01003635
366330
Actinomycetota
CTG
Gln
>WENV180023820
FTIF01000925
244362
Actinomycetota
CTC
Glu
>WENV180024059
FTIF01018831
421039
Actinomycetota
TCC
Gly
>WENV180024014
FTIF01008920
421039
Actinomycetota
TCC
Gly
>WENV180023988
FTIF01006139
149979
Actinomycetota
TGT
Thr
>WENV180023917
FTIF01003880
253739
Actinomycetota
CAT
Met
>WENV180023973
FTIF01005321
339525
Actinomycetota
GAC
Val
>WENV180024223
FTIF01323654
45081
Actinomycetota
GGA
Ser
>WENV180023796
FTIF01000430
45081
Actinomycetota
GGA
Ser
>WENV180023787
FTIF01000373
251503
Actinomycetota
GTT
Asn
>WENV180024055
FTIF01018511
235444
Actinomycetota
TGC
Ala
>WENV180024047
FTIF01016951
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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