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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170635281
JDSF01000777
161528
Campylobacterota
CAT
Met
>WENV170635271
JDSF01000556
253656
Campylobacterota
CCA
Trp
>WENV170635437
JDSF01021183
161529
Campylobacterota
CAT
Met
>WENV170635476
JDSF01030745
191925
Campylobacterota
GTC
Asp
>WENV170635420
JDSF01015195
338365
Campylobacterota
GGT
Thr
>WENV170635421
JDSF01015596
295659
Campylobacterota
TAC
Val
>WENV170635408
JDSF01014338
149512
Campylobacterota
GAT
Ile
>WENV170635327
JDSF01003121
149512
Campylobacterota
GAT
Ile
>WENV170635296
JDSF01000877
127427
Campylobacterota
TGG
Pro
>WENV170635244
JDSF01000383
149516
Campylobacterota
CAT
Met
>WENV170635286
JDSF01000778
61323
Campylobacterota
TAA
Leu
>WENV170635283
JDSF01000778
61323
Campylobacterota
TAA
Leu
>WENV170635423
JDSF01015596
268008
Campylobacterota
TTT
Lys
>WENV170635375
JDSF01007413
268008
Campylobacterota
TTT
Lys
>WENV170635305
JDSF01001266
250410
Campylobacterota
TTT
Lys
>WENV170635282
JDSF01000777
149518
Campylobacterota
TCC
Gly
>WENV170635270
JDSF01000556
149518
Campylobacterota
TCC
Gly
>WENV170635410
JDSF01014718
157046
Campylobacterota
TCC
Gly
>WENV170635268
JDSF01000556
154128
Campylobacterota
TGT
Thr
>WENV170635269
JDSF01000556
96412
Campylobacterota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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