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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646887
JQIA01005029
236929
Bacteroidota
TTT
Lys
>WENV170647023
JQIA01008325
236929
Bacteroidota
TTT
Lys
>WENV170646709
JQIA01001883
147880
Bacteroidota
GGC
Ala
>WENV170646851
JQIA01004450
179080
Bacteroidota
CAT
Met
>WENV170647136
JQIA01012854
238765
Bacteroidota
GCC
Gly
>WENV170647050
JQIA01008746
294483
Bacteroidota
TTT
Lys
>WENV170646633
JQIA01000652
172532
Bacteroidota
GTC
Asp
>WENV170647274
JQIA01018280
102360
Bacteroidota
TAG
Leu
>WENV170647257
JQIA01017887
127458
Bacteroidota
GAC
Val
>WENV170647602
JQIA01040233
338568
Bacteroidota
TTC
Glu
>WENV170646676
JQIA01001326
369129
Bacteroidota
TTC
Glu
>WENV170646774
JQIA01002893
412944
Bacteroidota
GCA
Cys
>WENV170646788
JQIA01003164
197066
Bacteroidota
GTT
Asn
>WENV170646699
JQIA01001788
145271
Bacteroidota
CAT
Met
>WENV170647200
JQIA01015863
17987
Bacteroidota
GGA
Ser
>WENV170646780
JQIA01002958
95727
Bacteroidota
TAG
Leu
>WENV170646558
JQIA01000038
341187
Bacteroidota
TTG
Gln
>WENV170646800
JQIA01003441
59930
Bacteroidota
GCT
Ser
>WENV170646920
JQIA01005795
341421
Bacteroidota
CCA
Trp
>WENV170646634
JQIA01000656
191853
Bacteroidota
TCG
Arg
>WENV170646933
JQIA01006127
246641
Bacteroidota
GAA
Phe
>WENV170647127
JQIA01012066
145408
Bacteroidota
TCT
Arg
>WENV170646655
JQIA01000940
136274
Bacteroidota
TAC
Val
>WENV170646804
JQIA01003529
49675
Bacteroidota
TGA
Ser
>WENV170647567
JQIA01036441
130083
Bacteroidota
TAC
Val
>WENV170646891
JQIA01005126
152405
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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