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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704693
LLEM01000054
147020
Gammaproteobacteria
GAC
Val
>WENV170704708
LLEM01000316
146646
Gammaproteobacteria
TGG
Pro
>WENV170704710
LLEM01000316
146646
Gammaproteobacteria
TGG
Pro
>WENV170704702
LLEM01000175
235450
Gammaproteobacteria
GTG
His
>WENV170704704
LLEM01000175
235450
Gammaproteobacteria
GTG
His
>WENV170704716
LLEM01000425
144917
Gammaproteobacteria
>WENV170704712
LLEM01000316
311624
Gammaproteobacteria
GTG
His
>WENV170704687
LLEM01000011
237221
Gammaproteobacteria
GGC
Ala
>WENV170704773
LLEM01011039
237221
Gammaproteobacteria
GGC
Ala
>WENV170704717
LLEM01000471
52727
Gammaproteobacteria
GGA
Ser
>WENV170704694
LLEM01000059
52727
Gammaproteobacteria
GGA
Ser
>WENV170704760
LLEM01007351
319914
Gammaproteobacteria
GTT
Asn
>WENV170704690
LLEM01000030
319914
Gammaproteobacteria
GTT
Asn
>WENV170704766
LLEM01008112
96362
Gammaproteobacteria
TAG
Leu
>WENV170704728
LLEM01001010
237220
Gammaproteobacteria
GTT
Asn
>WENV170704736
LLEM01001868
240084
Gammaproteobacteria
GGT
Thr
>WENV170704774
LLEM01011252
95870
Gammaproteobacteria
TAA
Leu
>WENV170704740
LLEM01002402
319098
Gammaproteobacteria
TAC
Val
>WENV170704767
LLEM01008112
338303
Gammaproteobacteria
>WENV170704776
LLEM01011408
267573
Gammaproteobacteria
TTT
Lys
>WENV170704699
LLEM01000115
152303
Gammaproteobacteria
TCT
Arg
>WENV170704770
LLEM01009714
193275
Gammaproteobacteria
GAT
Ile
>WENV170704729
LLEM01001052
144995
Gammaproteobacteria
GAT
Ile
>WENV170704753
LLEM01004896
146642
Gammaproteobacteria
CCA
Trp
>WENV170704730
LLEM01001088
146642
Gammaproteobacteria
CCA
Trp
>WENV170704731
LLEM01001311
432040
Gammaproteobacteria
GCA
Cys
>WENV170704713
LLEM01000340
432040
Gammaproteobacteria
GCA
Cys
>WENV170704698
LLEM01000093
432040
Gammaproteobacteria
GCA
Cys
>WENV170704733
LLEM01001366
277971
Gammaproteobacteria
GCC
Gly
>WENV170704759
LLEM01007351
235453
Gammaproteobacteria
GAA
Phe
>WENV170704711
LLEM01000316
182279
Gammaproteobacteria
TCT
Arg
>WENV170704742
LLEM01002419
24067
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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