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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779642
LZQQ01000776
144980
Gammaproteobacteria
CCG
Arg
>WENV170779623
LZQQ01000418
146662
Gammaproteobacteria
GAC
Val
>WENV170779610
LZQQ01000240
147373
Gammaproteobacteria
CAT
Met
>WENV170779592
LZQQ01000103
238370
Gammaproteobacteria
TTT
Lys
>WENV170779595
LZQQ01000140
238370
Gammaproteobacteria
TTT
Lys
>WENV170779650
LZQQ01000903
238370
Gammaproteobacteria
TTT
Lys
>WENV170779677
LZQQ01001843
238370
Gammaproteobacteria
TTT
Lys
>WENV170779615
LZQQ01000330
149066
Gammaproteobacteria
CAT
Met
>WENV170779584
LZQQ01000068
238499
Gammaproteobacteria
TAC
Val
>WENV170779672
LZQQ01001731
235516
Gammaproteobacteria
GTG
His
>WENV170779564
LZQQ01000010
235516
Gammaproteobacteria
GTG
His
>WENV170779575
LZQQ01000021
24435
Gammaproteobacteria
CGA
Ser
>WENV170779613
LZQQ01000322
26080
Gammaproteobacteria
GGA
Ser
>WENV170779626
LZQQ01000450
61925
Gammaproteobacteria
TAA
Leu
>WENV170779643
LZQQ01000816
175148
Gammaproteobacteria
TGG
Pro
>WENV170779556
LZQQ01000002
144981
Gammaproteobacteria
CCG
Arg
>WENV170779587
LZQQ01000073
17957
Gammaproteobacteria
TGA
Ser
>WENV170779651
LZQQ01000939
166173
Gammaproteobacteria
CAT
Met
>WENV170779662
LZQQ01001134
145196
Gammaproteobacteria
CAT
Met
>WENV170779681
LZQQ01002406
340812
Gammaproteobacteria
TTG
Gln
>WENV170779625
LZQQ01000450
413586
Gammaproteobacteria
GCA
Cys
>WENV170779645
LZQQ01000816
259164
Gammaproteobacteria
GTG
His
>WENV170779655
LZQQ01000980
235512
Gammaproteobacteria
GGT
Thr
>WENV170779588
LZQQ01000073
166645
Gammaproteobacteria
ACG
Arg
>WENV170779647
LZQQ01000839
235314
Gammaproteobacteria
CGT
Thr
>WENV170779663
LZQQ01001158
23429
Gammaproteobacteria
GGA
Ser
>WENV170779629
LZQQ01000501
236248
Gammaproteobacteria
TTT
Lys
>WENV170779562
LZQQ01000009
147595
Gammaproteobacteria
CCT
Arg
>WENV170779674
LZQQ01001768
166644
Gammaproteobacteria
CCA
Trp
>WENV170779635
LZQQ01000587
264150
Gammaproteobacteria
TGT
Thr
>WENV170779608
LZQQ01000225
24403
Gammaproteobacteria
TGA
Ser
>WENV170779606
LZQQ01000194
24403
Gammaproteobacteria
TGA
Ser
>WENV170779586
LZQQ01000070
267435
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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