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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170841640
MDSZ01226187
146962
Bacteroidota
CAT
Met
>WENV170842863
MDSZ01248940
146962
Bacteroidota
CAT
Met
>WENV170829334
MDSZ01006997
165001
Bacteroidota
GTT
Asn
>WENV170830005
MDSZ01019124
165001
Bacteroidota
GTT
Asn
>WENV170839698
MDSZ01190538
165001
Bacteroidota
GTT
Asn
>WENV170841165
MDSZ01217286
165001
Bacteroidota
GTT
Asn
>WENV170836409
MDSZ01131064
97610
Bacteroidota
GTA
Tyr
>WENV170841472
MDSZ01222752
237360
Bacteroidota
TTT
Lys
>WENV170836474
MDSZ01132259
99288
Bacteroidota
TAG
Leu
>WENV170833918
MDSZ01088342
179643
Bacteroidota
GTC
Asp
>WENV170837048
MDSZ01142198
416051
Bacteroidota
CCA
Trp
>WENV170841124
MDSZ01216581
172532
Bacteroidota
GTC
Asp
>WENV170836829
MDSZ01138306
172532
Bacteroidota
GTC
Asp
>WENV170830907
MDSZ01034976
145683
Bacteroidota
TGC
Ala
>WENV170829305
MDSZ01006343
154388
Bacteroidota
GTG
His
>WENV170832621
MDSZ01065604
127458
Bacteroidota
GAC
Val
>WENV170840618
MDSZ01207996
364423
Bacteroidota
GGT
Thr
>WENV170835899
MDSZ01121664
364423
Bacteroidota
GGT
Thr
>WENV170839107
MDSZ01179802
60611
Bacteroidota
GCT
Ser
>WENV170836773
MDSZ01137276
60611
Bacteroidota
GCT
Ser
>WENV170829000
MDSZ01000938
152447
Bacteroidota
GTT
Asn
>WENV170836702
MDSZ01135821
96678
Bacteroidota
TAG
Leu
>WENV170831153
MDSZ01039453
96678
Bacteroidota
TAG
Leu
>WENV170841381
MDSZ01221459
273242
Bacteroidota
CCA
Trp
>WENV170840619
MDSZ01207996
273242
Bacteroidota
CCA
Trp
>WENV170838062
MDSZ01160707
273242
Bacteroidota
CCA
Trp
>WENV170834993
MDSZ01106103
273242
Bacteroidota
CCA
Trp
>WENV170830513
MDSZ01028372
273242
Bacteroidota
CCA
Trp
>WENV170835791
MDSZ01120241
60695
Bacteroidota
GCT
Ser
>WENV170842567
MDSZ01243088
127288
Bacteroidota
TGG
Pro
>WENV170842540
MDSZ01242521
127414
Bacteroidota
TGG
Pro
>WENV170839839
MDSZ01193154
127414
Bacteroidota
TGG
Pro
>WENV170838456
MDSZ01168094
127414
Bacteroidota
TGG
Pro
>WENV170837471
MDSZ01149876
127414
Bacteroidota
TGG
Pro
>WENV170836533
MDSZ01133237
127414
Bacteroidota
TGG
Pro
>WENV170834517
MDSZ01098529
127414
Bacteroidota
TGG
Pro
>WENV170832189
MDSZ01057583
127414
Bacteroidota
TGG
Pro
>WENV170831814
MDSZ01051182
127414
Bacteroidota
TGG
Pro
>WENV170830848
MDSZ01033972
127414
Bacteroidota
TGG
Pro
>WENV170830089
MDSZ01020662
127414
Bacteroidota
TGG
Pro
>WENV170844107
MDSZ01272281
238764
Bacteroidota
>WENV170841389
MDSZ01221592
238764
Bacteroidota
>WENV170839832
MDSZ01192966
238764
Bacteroidota
>WENV170829616
MDSZ01011721
238764
Bacteroidota
>WENV170843904
MDSZ01268689
242524
Bacteroidota
GCC
Gly
>WENV170832514
MDSZ01063795
149691
Bacteroidota
GTT
Asn
>WENV170840890
MDSZ01212959
190649
Bacteroidota
GTT
Asn
>WENV170837891
MDSZ01157611
190649
Bacteroidota
GTT
Asn
>WENV170829988
MDSZ01018861
274593
Bacteroidota
TTG
Gln
>WENV170835752
MDSZ01119730
44938
Bacteroidota
TGA
Ser
>WENV170834423
MDSZ01096984
44938
Bacteroidota
TGA
Ser
>WENV170834320
MDSZ01095143
44938
Bacteroidota
TGA
Ser
>WENV170831613
MDSZ01047201
44938
Bacteroidota
TGA
Ser
>WENV170836174
MDSZ01126771
17987
Bacteroidota
GGA
Ser
>WENV170835131
MDSZ01108261
17987
Bacteroidota
GGA
Ser
>WENV170843640
MDSZ01263817
235935
Bacteroidota
TCC
Gly
>WENV170835111
MDSZ01107957
235935
Bacteroidota
TCC
Gly
>WENV170831337
MDSZ01042255
162699
Bacteroidota
TCT
Arg
>WENV170838636
MDSZ01171622
259147
Bacteroidota
TTT
Lys
>WENV170832440
MDSZ01062373
259147
Bacteroidota
TTT
Lys
>WENV170836926
MDSZ01140045
164115
Bacteroidota
TGT
Thr
>WENV170843639
MDSZ01263817
80676
Bacteroidota
GTA
Tyr
>WENV170834662
MDSZ01101047
193627
Bacteroidota
TCT
Arg
>WENV170841844
MDSZ01229782
150454
Bacteroidota
TGT
Thr
>WENV170836408
MDSZ01131064
150454
Bacteroidota
TGT
Thr
>WENV170841512
MDSZ01223716
246641
Bacteroidota
GAA
Phe
>WENV170840796
MDSZ01211471
246641
Bacteroidota
GAA
Phe
>WENV170837804
MDSZ01155624
246641
Bacteroidota
GAA
Phe
>WENV170832009
MDSZ01054588
246641
Bacteroidota
GAA
Phe
>WENV170831051
MDSZ01037824
246641
Bacteroidota
GAA
Phe
>WENV170829106
MDSZ01003040
246641
Bacteroidota
GAA
Phe
>WENV170836744
MDSZ01136698
145555
Bacteroidota
GTC
Asp
>WENV170836587
MDSZ01134218
145555
Bacteroidota
GTC
Asp
>WENV170841538
MDSZ01224242
185921
Bacteroidota
GTC
Asp
>WENV170841504
MDSZ01223558
185921
Bacteroidota
GTC
Asp
>WENV170840211
MDSZ01199481
185921
Bacteroidota
GTC
Asp
>WENV170839879
MDSZ01194027
185921
Bacteroidota
GTC
Asp
>WENV170834383
MDSZ01096265
185921
Bacteroidota
GTC
Asp
>WENV170830443
MDSZ01027009
185921
Bacteroidota
GTC
Asp
>WENV170838899
MDSZ01176210
145507
Bacteroidota
TCT
Arg
>WENV170834207
MDSZ01093728
81201
Bacteroidota
GTA
Tyr
>WENV170833399
MDSZ01079293
101439
Bacteroidota
TAG
Leu
>WENV170842193
MDSZ01235691
48382
Bacteroidota
TGA
Ser
>WENV170831017
MDSZ01037147
48382
Bacteroidota
TGA
Ser
>WENV170830496
MDSZ01027949
48382
Bacteroidota
TGA
Ser
>WENV170831949
MDSZ01053405
240620
Bacteroidota
GCC
Gly
>WENV170832024
MDSZ01054845
346602
Bacteroidota
TTC
Glu
>WENV170832023
MDSZ01054845
346602
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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