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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170941241
MDTG01357036
243300
Actinomycetota
CAC
Val
>WENV170921133
MDTG01008892
161445
Actinomycetota
TGG
Pro
>WENV170921301
MDTG01011680
161445
Actinomycetota
TGG
Pro
>WENV170938005
MDTG01301901
37078
Actinomycetota
GAG
Leu
>WENV170921712
MDTG01018962
338763
Actinomycetota
GCC
Gly
>WENV170941940
MDTG01369241
240825
Actinomycetota
GTG
His
>WENV170931818
MDTG01191678
242814
Actinomycetota
TTT
Lys
>WENV170938582
MDTG01311335
343516
Actinomycetota
CCT
Arg
>WENV170935543
MDTG01258941
343516
Actinomycetota
CCT
Arg
>WENV170923083
MDTG01042765
343516
Actinomycetota
CCT
Arg
>WENV170920727
MDTG01001734
413688
Actinomycetota
CCC
Gly
>WENV170934556
MDTG01240758
45926
Actinomycetota
TGA
Ser
>WENV170927765
MDTG01122523
95968
Actinomycetota
TAG
Leu
>WENV170933936
MDTG01229319
146611
Actinomycetota
CGG
Pro
>WENV170924327
MDTG01064210
257634
Actinomycetota
TTT
Lys
>WENV170933207
MDTG01216931
148837
Actinomycetota
CAT
Met
>WENV170924197
MDTG01061652
37306
Actinomycetota
GAG
Leu
>WENV170921134
MDTG01008892
411983
Actinomycetota
TCC
Gly
>WENV170937528
MDTG01293182
95931
Actinomycetota
GTA
Tyr
>WENV170924900
MDTG01073825
95931
Actinomycetota
GTA
Tyr
>WENV170927251
MDTG01114142
16376
Actinomycetota
CGA
Ser
>WENV170934774
MDTG01244423
240687
Actinomycetota
>WENV170939127
MDTG01320556
236214
Actinomycetota
CCA
Trp
>WENV170924328
MDTG01064210
45767
Actinomycetota
GGA
Ser
>WENV170942393
MDTG01377345
254605
Actinomycetota
TAA
Leu
>WENV170939244
MDTG01322640
162173
Actinomycetota
TGG
Pro
>WENV170922757
MDTG01036951
162173
Actinomycetota
TGG
Pro
>WENV170930735
MDTG01172593
237513
Actinomycetota
ACG
Arg
>WENV170922954
MDTG01040492
248046
Actinomycetota
CCA
Trp
>WENV170921044
MDTG01007207
11546
Actinomycetota
GCT
Ser
>WENV170940759
MDTG01348654
237593
Actinomycetota
GTT
Asn
>WENV170934577
MDTG01241096
342999
Actinomycetota
GGT
Thr
>WENV170935835
MDTG01264464
255588
Actinomycetota
CCG
Arg
>WENV170933937
MDTG01229381
255588
Actinomycetota
CCG
Arg
>WENV170926014
MDTG01093532
254606
Actinomycetota
CCG
Arg
>WENV170929200
MDTG01146461
81941
Actinomycetota
CAG
Leu
>WENV170922882
MDTG01039477
344380
Actinomycetota
GAC
Val
>WENV170934578
MDTG01241096
146888
Actinomycetota
CAT
Met
>WENV170934704
MDTG01243231
237445
Actinomycetota
GGT
Thr
>WENV170922805
MDTG01038059
243579
Actinomycetota
CGC
Ala
>WENV170935303
MDTG01254336
152456
Actinomycetota
CAT
Met
>WENV170923154
MDTG01044216
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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