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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180123820
OASX01000273
235097
Bacteroidota
TTT
Lys
>WENV180123837
OASX01000312
235097
Bacteroidota
TTT
Lys
>WENV180123843
OASX01000330
235097
Bacteroidota
TTT
Lys
>WENV180124557
OASX01027787
235102
Bacteroidota
CGT
Thr
>WENV180123667
OASX01000102
144657
Bacteroidota
CGG
Pro
>WENV180124038
OASX01001360
338155
Bacteroidota
CTC
Glu
>WENV180123807
OASX01000253
339341
Bacteroidota
GGT
Thr
>WENV180123644
OASX01000085
343138
Bacteroidota
CCT
Arg
>WENV180123755
OASX01000205
343138
Bacteroidota
CCT
Arg
>WENV180123632
OASX01000075
58715
Bacteroidota
GAG
Leu
>WENV180123957
OASX01000715
338486
Bacteroidota
CAT
Met
>WENV180123862
OASX01000397
338486
Bacteroidota
CAT
Met
>WENV180123749
OASX01000192
415410
Bacteroidota
TTG
Gln
>WENV180123575
OASX01000030
415410
Bacteroidota
TTG
Gln
>WENV180123664
OASX01000102
59689
Bacteroidota
CAG
Leu
>WENV180123631
OASX01000075
59689
Bacteroidota
CAG
Leu
>WENV180124276
OASX01005127
188343
Bacteroidota
TGC
Ala
>WENV180124455
OASX01014588
188343
Bacteroidota
TGC
Ala
>WENV180123621
OASX01000069
338124
Bacteroidota
CCG
Arg
>WENV180123810
OASX01000256
235203
Bacteroidota
TTT
Lys
>WENV180123646
OASX01000086
235203
Bacteroidota
TTT
Lys
>WENV180124096
OASX01001900
238121
Bacteroidota
CTT
Lys
>WENV180124095
OASX01001900
238121
Bacteroidota
CTT
Lys
>WENV180123951
OASX01000684
126641
Bacteroidota
TAC
Val
>WENV180123950
OASX01000684
126641
Bacteroidota
TAC
Val
>WENV180123557
OASX01000026
126641
Bacteroidota
TAC
Val
>WENV180123556
OASX01000026
126641
Bacteroidota
TAC
Val
>WENV180123902
OASX01000501
338132
Bacteroidota
GCA
Cys
>WENV180123877
OASX01000422
338132
Bacteroidota
GCA
Cys
>WENV180123830
OASX01000309
338132
Bacteroidota
GCA
Cys
>WENV180123763
OASX01000216
338132
Bacteroidota
GCA
Cys
>WENV180123734
OASX01000172
338132
Bacteroidota
GCA
Cys
>WENV180124097
OASX01001900
45423
Bacteroidota
TGA
Ser
>WENV180123932
OASX01000625
45423
Bacteroidota
TGA
Ser
>WENV180123671
OASX01000104
58714
Bacteroidota
CAA
Leu
>WENV180123678
OASX01000114
280660
Bacteroidota
CCA
Trp
>WENV180123762
OASX01000215
144933
Bacteroidota
TCT
Arg
>WENV180123941
OASX01000645
144656
Bacteroidota
GTG
His
>WENV180124089
OASX01001860
235207
Bacteroidota
CAT
Met
>WENV180123872
OASX01000405
144659
Bacteroidota
GTG
His
>WENV180123871
OASX01000405
144659
Bacteroidota
GTG
His
>WENV180123668
OASX01000102
235180
Bacteroidota
CCA
Trp
>WENV180123719
OASX01000150
144596
Bacteroidota
GGC
Ala
>WENV180123973
OASX01000840
80607
Bacteroidota
GTA
Tyr
>WENV180123949
OASX01000679
80607
Bacteroidota
GTA
Tyr
>WENV180123610
OASX01000054
80607
Bacteroidota
GTA
Tyr
>WENV180123522
OASX01000009
80607
Bacteroidota
GTA
Tyr
>WENV180124607
OASX01041338
113604
Bacteroidota
>WENV180124085
OASX01001807
16999
Bacteroidota
GGA
Ser
>WENV180123511
OASX01000003
16999
Bacteroidota
GGA
Ser
>WENV180123860
OASX01000392
80614
Bacteroidota
>WENV180123806
OASX01000253
80614
Bacteroidota
>WENV180123648
OASX01000086
80614
Bacteroidota
>WENV180124552
OASX01025894
144590
Bacteroidota
GTT
Asn
>WENV180123971
OASX01000840
144590
Bacteroidota
GTT
Asn
>WENV180123970
OASX01000840
144590
Bacteroidota
GTT
Asn
>WENV180123948
OASX01000677
95559
Bacteroidota
TAG
Leu
>WENV180124273
OASX01005068
419272
Bacteroidota
CTG
Gln
>WENV180123643
OASX01000084
144655
Bacteroidota
GGC
Ala
>WENV180123757
OASX01000205
338164
Bacteroidota
TTC
Glu
>WENV180123756
OASX01000205
338164
Bacteroidota
TTC
Glu
>WENV180123670
OASX01000104
95875
Bacteroidota
TAG
Leu
>WENV180123599
OASX01000044
240012
Bacteroidota
CCC
Gly
>WENV180123554
OASX01000025
44852
Bacteroidota
TAA
Leu
>WENV180123598
OASX01000044
147439
Bacteroidota
TCT
Arg
>WENV180123657
OASX01000094
411550
Bacteroidota
CTG
Gln
>WENV180123656
OASX01000094
411550
Bacteroidota
CTG
Gln
>WENV180123701
OASX01000135
338165
Bacteroidota
GGT
Thr
>WENV180123687
OASX01000125
338165
Bacteroidota
GGT
Thr
>WENV180123549
OASX01000022
19528
Bacteroidota
GGA
Ser
>WENV180124654
OASX01062649
50727
Bacteroidota
TGA
Ser
>WENV180124013
OASX01001105
50727
Bacteroidota
TGA
Ser
>WENV180123887
OASX01000467
50727
Bacteroidota
TGA
Ser
>WENV180123869
OASX01000404
50727
Bacteroidota
TGA
Ser
>WENV180123848
OASX01000344
50727
Bacteroidota
TGA
Ser
>WENV180123740
OASX01000183
50727
Bacteroidota
TGA
Ser
>WENV180123710
OASX01000146
50727
Bacteroidota
TGA
Ser
>WENV180123548
OASX01000022
50727
Bacteroidota
TGA
Ser
>WENV180123547
OASX01000022
50727
Bacteroidota
TGA
Ser
>WENV180124024
OASX01001199
132360
Bacteroidota
GGG
Pro
>WENV180123923
OASX01000551
132360
Bacteroidota
GGG
Pro
>WENV180123524
OASX01000010
132360
Bacteroidota
GGG
Pro
>WENV180123822
OASX01000280
425638
Bacteroidota
CTG
Gln
>WENV180123523
OASX01000010
425638
Bacteroidota
CTG
Gln
>WENV180123519
OASX01000007
425638
Bacteroidota
CTG
Gln
>WENV180123516
OASX01000006
425638
Bacteroidota
CTG
Gln
>WENV180123968
OASX01000837
239647
Bacteroidota
TTT
Lys
>WENV180123750
OASX01000195
239647
Bacteroidota
TTT
Lys
>WENV180123624
OASX01000072
239647
Bacteroidota
TTT
Lys
>WENV180123870
OASX01000404
19317
Bacteroidota
GGA
Ser
>WENV180123908
OASX01000513
185921
Bacteroidota
GTC
Asp
>WENV180123659
OASX01000096
185921
Bacteroidota
GTC
Asp
>WENV180123658
OASX01000096
185921
Bacteroidota
GTC
Asp
>WENV180123832
OASX01000309
23696
Bacteroidota
GCT
Ser
>WENV180124583
OASX01034062
16224
Bacteroidota
GGA
Ser
>WENV180124388
OASX01010188
16224
Bacteroidota
GGA
Ser
>WENV180123883
OASX01000445
16220
Bacteroidota
GGA
Ser
>WENV180123826
OASX01000304
338125
Bacteroidota
CCT
Arg
>WENV180123555
OASX01000025
338125
Bacteroidota
CCT
Arg
>WENV180123550
OASX01000023
338125
Bacteroidota
CCT
Arg
>WENV180124665
OASX01062874
235129
Bacteroidota
GCC
Gly
>WENV180123630
OASX01000075
235129
Bacteroidota
GCC
Gly
>WENV180123885
OASX01000455
411629
Bacteroidota
TTG
Gln
>WENV180123655
OASX01000089
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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