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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180129222
OATC01000076
243647
Bacillota
TTT
Lys
>WENV180129273
OATC01000229
243647
Bacillota
TTT
Lys
>WENV180129464
OATC01010535
37110
Bacillota
TAA
Leu
>WENV180129134
OATC01000007
16842
Bacillota
CGA
Ser
>WENV180129358
OATC01001526
339904
Bacillota
GCC
Gly
>WENV180129301
OATC01000554
340021
Bacillota
CTC
Glu
>WENV180129280
OATC01000229
235693
Bacillota
GGT
Thr
>WENV180129466
OATC01010681
339825
Bacillota
CCG
Arg
>WENV180129451
OATC01006979
156189
Bacillota
GAT
Ile
>WENV180129479
OATC01013181
155040
Bacillota
GAT
Ile
>WENV180129487
OATC01015717
338544
Bacillota
TGT
Thr
>WENV180129333
OATC01001037
338544
Bacillota
TGT
Thr
>WENV180129421
OATC01004478
246023
Bacillota
TGC
Ala
>WENV180129357
OATC01001526
113680
Bacillota
TAG
Leu
>WENV180129303
OATC01000568
16285
Bacillota
GCT
Ser
>WENV180129412
OATC01003639
412345
Bacillota
CTG
Gln
>WENV180129356
OATC01001526
235903
Bacillota
TTT
Lys
>WENV180129473
OATC01011871
147758
Bacillota
CGG
Pro
>WENV180129251
OATC01000160
23437
Bacillota
GGA
Ser
>WENV180129455
OATC01008605
237265
Bacillota
TAC
Val
>WENV180129411
OATC01003545
341763
Bacillota
CTC
Glu
>WENV180129478
OATC01012433
145606
Bacillota
GTC
Asp
>WENV180129172
OATC01000025
16834
Bacillota
GCT
Ser
>WENV180129124
OATC01000003
114002
Bacillota
CAA
Leu
>WENV180129133
OATC01000006
37437
Bacillota
TAA
Leu
>WENV180129447
OATC01005722
339935
Bacillota
GTT
Asn
>WENV180129275
OATC01000229
243612
Bacillota
TAC
Val
>WENV180129224
OATC01000076
243612
Bacillota
TAC
Val
>WENV180129307
OATC01000647
338547
Bacillota
GCA
Cys
>WENV180129369
OATC01001896
413152
Bacillota
TCC
Gly
>WENV180129118
OATC01000003
147135
Bacillota
ACG
Arg
>WENV180129316
OATC01000756
353537
Bacillota
GTT
Asn
>WENV180129355
OATC01001526
338548
Bacillota
TTG
Gln
>WENV180129296
OATC01000420
338555
Bacillota
CCT
Arg
>WENV180129313
OATC01000729
243345
Bacillota
GAA
Phe
>WENV180129123
OATC01000003
342895
Bacillota
CAT
Met
>WENV180129256
OATC01000178
254697
Bacillota
TTT
Lys
>WENV180129352
OATC01001526
147692
Bacillota
TCG
Arg
>WENV180129457
OATC01008686
241471
Bacillota
TGC
Ala
>WENV180129137
OATC01000007
250349
Bacillota
GAA
Phe
>WENV180129130
OATC01000006
250349
Bacillota
GAA
Phe
>WENV180129332
OATC01001037
258868
Bacillota
TAC
Val
>WENV180129477
OATC01012433
258868
Bacillota
TAC
Val
>WENV180129294
OATC01000343
238413
Bacillota
GGT
Thr
>WENV180129136
OATC01000007
235197
Bacillota
GTC
Asp
>WENV180129129
OATC01000006
235197
Bacillota
GTC
Asp
>WENV180129354
OATC01001526
235905
Bacillota
GTG
His
>WENV180129491
OATC01017925
411739
Bacillota
TCC
Gly
>WENV180129288
OATC01000262
411739
Bacillota
TCC
Gly
>WENV180129383
OATC01002228
235506
Bacillota
TGC
Ala
>WENV180129183
OATC01000039
243613
Bacillota
GTG
His
>WENV180129434
OATC01004899
238493
Bacillota
CGC
Ala
>WENV180129289
OATC01000262
145383
Bacillota
TCT
Arg
>WENV180129353
OATC01001526
145383
Bacillota
TCT
Arg
>WENV180129281
OATC01000229
152491
Bacillota
CAT
Met
>WENV180129476
OATC01012433
338545
Bacillota
>WENV180129171
OATC01000024
413657
Bacillota
CCC
Gly
>WENV180129184
OATC01000039
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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