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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180131825
OATH01000156
80614
Bacteroidota
>WENV180131741
OATH01000062
80614
Bacteroidota
>WENV180131800
OATH01000118
58714
Bacteroidota
CAA
Leu
>WENV180131737
OATH01000061
59689
Bacteroidota
CAG
Leu
>WENV180131673
OATH01000025
59689
Bacteroidota
CAG
Leu
>WENV180131693
OATH01000035
338486
Bacteroidota
CAT
Met
>WENV180131639
OATH01000006
338486
Bacteroidota
CAT
Met
>WENV180131976
OATH01000503
235207
Bacteroidota
CAT
Met
>WENV180131824
OATH01000151
235207
Bacteroidota
CAT
Met
>WENV180131677
OATH01000025
235180
Bacteroidota
CCA
Trp
>WENV180131720
OATH01000047
240012
Bacteroidota
CCC
Gly
>WENV180131902
OATH01000316
338124
Bacteroidota
CCG
Arg
>WENV180131719
OATH01000046
338124
Bacteroidota
CCG
Arg
>WENV180131643
OATH01000007
343138
Bacteroidota
CCT
Arg
>WENV180131848
OATH01000204
343138
Bacteroidota
CCT
Arg
>WENV180131930
OATH01000371
338125
Bacteroidota
CCT
Arg
>WENV180131786
OATH01000103
338125
Bacteroidota
CCT
Arg
>WENV180131676
OATH01000025
144657
Bacteroidota
CGG
Pro
>WENV180131969
OATH01000495
301449
Bacteroidota
CGG
Pro
>WENV180131904
OATH01000318
301449
Bacteroidota
CGG
Pro
>WENV180131891
OATH01000302
301449
Bacteroidota
CGG
Pro
>WENV180131816
OATH01000137
301449
Bacteroidota
CGG
Pro
>WENV180131718
OATH01000043
301449
Bacteroidota
CGG
Pro
>WENV180131716
OATH01000041
235102
Bacteroidota
CGT
Thr
>WENV180131802
OATH01000123
235102
Bacteroidota
CGT
Thr
>WENV180131967
OATH01000489
338155
Bacteroidota
CTC
Glu
>WENV180131764
OATH01000084
419272
Bacteroidota
CTG
Gln
>WENV180131685
OATH01000029
419272
Bacteroidota
CTG
Gln
>WENV180131670
OATH01000024
411550
Bacteroidota
CTG
Gln
>WENV180131669
OATH01000024
411550
Bacteroidota
CTG
Gln
>WENV180131887
OATH01000288
425638
Bacteroidota
CTG
Gln
>WENV180131799
OATH01000115
425638
Bacteroidota
CTG
Gln
>WENV180131726
OATH01000052
425638
Bacteroidota
CTG
Gln
>WENV180131650
OATH01000012
238121
Bacteroidota
CTT
Lys
>WENV180131649
OATH01000012
238121
Bacteroidota
CTT
Lys
>WENV180131738
OATH01000061
58715
Bacteroidota
GAG
Leu
>WENV180132178
OATH01002107
338132
Bacteroidota
GCA
Cys
>WENV180132166
OATH01001917
338132
Bacteroidota
GCA
Cys
>WENV180132161
OATH01001721
338132
Bacteroidota
GCA
Cys
>WENV180131684
OATH01000028
338132
Bacteroidota
GCA
Cys
>WENV180131671
OATH01000024
338132
Bacteroidota
GCA
Cys
>WENV180131736
OATH01000061
235129
Bacteroidota
GCC
Gly
>WENV180131697
OATH01000036
235129
Bacteroidota
GCC
Gly
>WENV180131695
OATH01000036
235129
Bacteroidota
GCC
Gly
>WENV180131925
OATH01000356
23696
Bacteroidota
GCT
Ser
>WENV180131679
OATH01000025
20893
Bacteroidota
GGA
Ser
>WENV180131653
OATH01000012
20893
Bacteroidota
GGA
Ser
>WENV180131783
OATH01000098
19317
Bacteroidota
GGA
Ser
>WENV180131686
OATH01000029
19317
Bacteroidota
GGA
Ser
>WENV180131760
OATH01000078
16224
Bacteroidota
GGA
Ser
>WENV180131990
OATH01000604
16220
Bacteroidota
GGA
Ser
>WENV180132164
OATH01001874
144596
Bacteroidota
GGC
Ala
>WENV180131876
OATH01000256
144655
Bacteroidota
GGC
Ala
>WENV180131765
OATH01000084
132360
Bacteroidota
GGG
Pro
>WENV180131687
OATH01000029
132360
Bacteroidota
GGG
Pro
>WENV180131730
OATH01000055
339341
Bacteroidota
GGT
Thr
>WENV180132272
OATH01010580
338165
Bacteroidota
GGT
Thr
>WENV180132258
OATH01004929
338165
Bacteroidota
GGT
Thr
>WENV180132290
OATH01014122
80607
Bacteroidota
GTA
Tyr
>WENV180132243
OATH01003451
80607
Bacteroidota
GTA
Tyr
>WENV180132076
OATH01000976
80607
Bacteroidota
GTA
Tyr
>WENV180131927
OATH01000359
80607
Bacteroidota
GTA
Tyr
>WENV180131924
OATH01000354
80607
Bacteroidota
GTA
Tyr
>WENV180131723
OATH01000050
80607
Bacteroidota
GTA
Tyr
>WENV180131864
OATH01000236
185921
Bacteroidota
GTC
Asp
>WENV180131863
OATH01000236
185921
Bacteroidota
GTC
Asp
>WENV180131732
OATH01000057
185921
Bacteroidota
GTC
Asp
>WENV180132168
OATH01001933
144656
Bacteroidota
GTG
His
>WENV180131910
OATH01000327
144659
Bacteroidota
GTG
His
>WENV180131909
OATH01000327
144659
Bacteroidota
GTG
His
>WENV180132285
OATH01011910
144590
Bacteroidota
GTT
Asn
>WENV180132284
OATH01011838
144590
Bacteroidota
GTT
Asn
>WENV180131690
OATH01000031
44852
Bacteroidota
TAA
Leu
>WENV180131907
OATH01000323
126641
Bacteroidota
TAC
Val
>WENV180131906
OATH01000323
126641
Bacteroidota
TAC
Val
>WENV180131900
OATH01000309
95559
Bacteroidota
TAG
Leu
>WENV180131901
OATH01000312
95875
Bacteroidota
TAG
Leu
>WENV180131928
OATH01000360
144933
Bacteroidota
TCT
Arg
>WENV180131768
OATH01000088
144933
Bacteroidota
TCT
Arg
>WENV180131834
OATH01000170
147439
Bacteroidota
TCT
Arg
>WENV180131652
OATH01000012
46165
Bacteroidota
TGA
Ser
>WENV180131651
OATH01000012
45423
Bacteroidota
TGA
Ser
>WENV180132295
OATH01018449
52358
Bacteroidota
TGA
Ser
>WENV180132206
OATH01002605
52358
Bacteroidota
TGA
Ser
>WENV180131962
OATH01000469
52358
Bacteroidota
TGA
Ser
>WENV180131950
OATH01000431
52358
Bacteroidota
TGA
Ser
>WENV180131943
OATH01000396
52358
Bacteroidota
TGA
Ser
>WENV180131886
OATH01000283
52358
Bacteroidota
TGA
Ser
>WENV180131789
OATH01000108
52358
Bacteroidota
TGA
Ser
>WENV180131769
OATH01000089
52358
Bacteroidota
TGA
Ser
>WENV180131647
OATH01000009
52358
Bacteroidota
TGA
Ser
>WENV180131641
OATH01000007
338164
Bacteroidota
TTC
Glu
>WENV180131640
OATH01000007
338164
Bacteroidota
TTC
Glu
>WENV180132109
OATH01001234
415410
Bacteroidota
TTG
Gln
>WENV180132005
OATH01000678
415410
Bacteroidota
TTG
Gln
>WENV180131681
OATH01000026
411629
Bacteroidota
TTG
Gln
>WENV180131961
OATH01000458
235097
Bacteroidota
TTT
Lys
>WENV180132101
OATH01001128
235097
Bacteroidota
TTT
Lys
>WENV180131751
OATH01000072
235203
Bacteroidota
TTT
Lys
>WENV180131739
OATH01000062
235203
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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