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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180136600
OATN01000146
235146
Actinomycetota
CGT
Thr
>WENV180136571
OATN01000098
235347
Actinomycetota
GGC
Ala
>WENV180136572
OATN01000098
235347
Actinomycetota
GGC
Ala
>WENV180136519
OATN01000044
166493
Actinomycetota
CTT
Lys
>WENV180136526
OATN01000056
166493
Actinomycetota
CTT
Lys
>WENV180136495
OATN01000029
166750
Actinomycetota
CAT
Met
>WENV180136688
OATN01000361
16400
Actinomycetota
GAG
Leu
>WENV180136573
OATN01000098
144600
Actinomycetota
TGG
Pro
>WENV180136586
OATN01000118
235194
Actinomycetota
GTG
His
>WENV180136595
OATN01000138
158720
Actinomycetota
ACG
Arg
>WENV180136594
OATN01000138
158720
Actinomycetota
ACG
Arg
>WENV180136530
OATN01000059
158720
Actinomycetota
ACG
Arg
>WENV180136735
OATN01000707
238476
Actinomycetota
CAC
Val
>WENV180136578
OATN01000103
238476
Actinomycetota
CAC
Val
>WENV180136722
OATN01000626
411601
Actinomycetota
CCC
Gly
>WENV180136670
OATN01000290
144826
Actinomycetota
GGG
Pro
>WENV180136451
OATN01000007
144826
Actinomycetota
GGG
Pro
>WENV180136569
OATN01000096
23370
Actinomycetota
GCT
Ser
>WENV180136531
OATN01000059
147146
Actinomycetota
ACG
Arg
>WENV180136713
OATN01000535
338239
Actinomycetota
TTC
Glu
>WENV180136542
OATN01000072
16219
Actinomycetota
GCT
Ser
>WENV180136522
OATN01000048
235174
Actinomycetota
TGC
Ala
>WENV180136487
OATN01000024
235174
Actinomycetota
TGC
Ala
>WENV180136675
OATN01000304
235101
Actinomycetota
TTT
Lys
>WENV180136518
OATN01000044
235101
Actinomycetota
TTT
Lys
>WENV180136515
OATN01000043
121510
Actinomycetota
TAA
Leu
>WENV180136622
OATN01000194
44855
Actinomycetota
TGA
Ser
>WENV180136592
OATN01000135
44855
Actinomycetota
TGA
Ser
>WENV180136489
OATN01000027
145345
Actinomycetota
TAC
Val
>WENV180136494
OATN01000029
235199
Actinomycetota
CAC
Val
>WENV180136449
OATN01000007
235199
Actinomycetota
CAC
Val
>WENV180136593
OATN01000136
44862
Actinomycetota
CGA
Ser
>WENV180136570
OATN01000098
413665
Actinomycetota
TTG
Gln
>WENV180136557
OATN01000082
413665
Actinomycetota
TTG
Gln
>WENV180136491
OATN01000029
254857
Actinomycetota
CCG
Arg
>WENV180136718
OATN01000540
113703
Actinomycetota
TAG
Leu
>WENV180136863
OATN01021377
235388
Actinomycetota
GTG
His
>WENV180136706
OATN01000457
243671
Actinomycetota
CTC
Glu
>WENV180136625
OATN01000206
243671
Actinomycetota
CTC
Glu
>WENV180136543
OATN01000072
45147
Actinomycetota
CGA
Ser
>WENV180136707
OATN01000457
338148
Actinomycetota
CTG
Gln
>WENV180136626
OATN01000206
338148
Actinomycetota
CTG
Gln
>WENV180136533
OATN01000060
235148
Actinomycetota
GTT
Asn
>WENV180136532
OATN01000060
235148
Actinomycetota
GTT
Asn
>WENV180136507
OATN01000037
237792
Actinomycetota
CCT
Arg
>WENV180136534
OATN01000061
113702
Actinomycetota
TAA
Leu
>WENV180136597
OATN01000145
144825
Actinomycetota
CAT
Met
>WENV180136537
OATN01000063
235348
Actinomycetota
CCT
Arg
>WENV180136705
OATN01000447
237794
Actinomycetota
CCG
Arg
>WENV180136574
OATN01000099
411554
Actinomycetota
CCC
Gly
>WENV180136599
OATN01000146
113601
Actinomycetota
TAG
Leu
>WENV180136535
OATN01000061
144595
Actinomycetota
CAA
Leu
>WENV180136516
OATN01000043
144595
Actinomycetota
CAA
Leu
>WENV180136717
OATN01000540
235121
Actinomycetota
CGT
Thr
>WENV180136598
OATN01000146
235121
Actinomycetota
CGT
Thr
>WENV180136660
OATN01000242
47164
Actinomycetota
GGA
Ser
>WENV180136517
OATN01000044
47164
Actinomycetota
GGA
Ser
>WENV180136773
OATN01002334
80622
Actinomycetota
CAG
Leu
>WENV180136700
OATN01000418
80622
Actinomycetota
CAG
Leu
>WENV180136741
OATN01000922
147734
Actinomycetota
GTC
Asp
>WENV180136671
OATN01000292
147734
Actinomycetota
GTC
Asp
>WENV180136563
OATN01000087
147734
Actinomycetota
GTC
Asp
>WENV180136562
OATN01000087
147734
Actinomycetota
GTC
Asp
>WENV180136452
OATN01000007
16222
Actinomycetota
GAG
Leu
>WENV180136747
OATN01001172
163948
Actinomycetota
CAT
Met
>WENV180136736
OATN01000707
235173
Actinomycetota
GGC
Ala
>WENV180136556
OATN01000082
235173
Actinomycetota
GGC
Ala
>WENV180136611
OATN01000174
243162
Actinomycetota
GTT
Asn
>WENV180136580
OATN01000109
243162
Actinomycetota
GTT
Asn
>WENV180136511
OATN01000039
144660
Actinomycetota
TAC
Val
>WENV180136693
OATN01000379
95593
Actinomycetota
>WENV180136567
OATN01000096
95593
Actinomycetota
>WENV180136669
OATN01000285
144823
Actinomycetota
TCT
Arg
>WENV180136640
OATN01000235
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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