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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180136529
OATN01000057
243647
Bacillota
TTT
Lys
>WENV180136549
OATN01000078
243647
Bacillota
TTT
Lys
>WENV180136860
OATN01020666
16469
Bacillota
GCT
Ser
>WENV180136504
OATN01000033
16842
Bacillota
CGA
Ser
>WENV180136854
OATN01018773
415708
Bacillota
CCA
Trp
>WENV180136681
OATN01000332
235693
Bacillota
GGT
Thr
>WENV180136829
OATN01010270
339825
Bacillota
CCG
Arg
>WENV180136776
OATN01002387
155040
Bacillota
GAT
Ile
>WENV180136590
OATN01000125
411591
Bacillota
GGT
Thr
>WENV180136845
OATN01014433
239201
Bacillota
GAA
Phe
>WENV180136808
OATN01004652
238494
Bacillota
GGC
Ala
>WENV180136814
OATN01006292
412345
Bacillota
CTG
Gln
>WENV180136837
OATN01013342
147758
Bacillota
CGG
Pro
>WENV180136821
OATN01008760
237265
Bacillota
TAC
Val
>WENV180136746
OATN01001127
147760
Bacillota
TCT
Arg
>WENV180136469
OATN01000014
16834
Bacillota
GCT
Ser
>WENV180136841
OATN01014433
339151
Bacillota
TTC
Glu
>WENV180136470
OATN01000015
114002
Bacillota
CAA
Leu
>WENV180136468
OATN01000013
37437
Bacillota
TAA
Leu
>WENV180136811
OATN01005839
339935
Bacillota
GTT
Asn
>WENV180136855
OATN01018773
238496
Bacillota
GTG
His
>WENV180136551
OATN01000078
243612
Bacillota
TAC
Val
>WENV180136787
OATN01003150
237346
Bacillota
CGT
Thr
>WENV180136744
OATN01001073
59329
Bacillota
CAA
Leu
>WENV180136866
OATN01022252
80954
Bacillota
TAG
Leu
>WENV180136848
OATN01015610
6999
Bacillota
GGA
Ser
>WENV180136430
OATN01000004
147135
Bacillota
ACG
Arg
>WENV180136435
OATN01000004
342895
Bacillota
CAT
Met
>WENV180136782
OATN01002825
16440
Bacillota
CGA
Ser
>WENV180136822
OATN01008760
238497
Bacillota
TTT
Lys
>WENV180136762
OATN01001572
241471
Bacillota
TGC
Ala
>WENV180136499
OATN01000033
250349
Bacillota
GAA
Phe
>WENV180136465
OATN01000013
250349
Bacillota
GAA
Phe
>WENV180136498
OATN01000033
235197
Bacillota
GTC
Asp
>WENV180136464
OATN01000013
235197
Bacillota
GTC
Asp
>WENV180136527
OATN01000057
243613
Bacillota
GTG
His
>WENV180136807
OATN01004652
238493
Bacillota
CGC
Ala
>WENV180136768
OATN01001819
412403
Bacillota
CCC
Gly
>WENV180136749
OATN01001275
45242
Bacillota
CAG
Leu
>WENV180136682
OATN01000332
152491
Bacillota
CAT
Met
>WENV180136748
OATN01001176
347434
Bacillota
CTC
Glu
>WENV180136496
OATN01000030
413657
Bacillota
CCC
Gly
>WENV180136842
OATN01014433
3285
Bacillota
TGA
Ser
>WENV180136528
OATN01000057
343027
Bacillota
TTG
Gln
>WENV180136858
OATN01020647
37258
Bacillota
AAG
Leu
>WENV180136846
OATN01014433
113740
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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