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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180146312
OAUF01000137
235097
Bacteroidota
TTT
Lys
>WENV180146461
OAUF01000400
235097
Bacteroidota
TTT
Lys
>WENV180146482
OAUF01000446
235102
Bacteroidota
CGT
Thr
>WENV180146566
OAUF01000879
144657
Bacteroidota
CGG
Pro
>WENV180146263
OAUF01000085
338155
Bacteroidota
CTC
Glu
>WENV180146423
OAUF01000344
338155
Bacteroidota
CTC
Glu
>WENV180146256
OAUF01000078
339341
Bacteroidota
GGT
Thr
>WENV180146720
OAUF01003927
343138
Bacteroidota
CCT
Arg
>WENV180146149
OAUF01000003
58715
Bacteroidota
GAG
Leu
>WENV180146825
OAUF01023790
46165
Bacteroidota
TGA
Ser
>WENV180146618
OAUF01001367
338486
Bacteroidota
CAT
Met
>WENV180146560
OAUF01000872
338486
Bacteroidota
CAT
Met
>WENV180146474
OAUF01000431
338486
Bacteroidota
CAT
Met
>WENV180146473
OAUF01000431
338486
Bacteroidota
CAT
Met
>WENV180146594
OAUF01001097
59689
Bacteroidota
CAG
Leu
>WENV180146617
OAUF01001342
436206
Bacteroidota
TTG
Gln
>WENV180146340
OAUF01000166
436206
Bacteroidota
TTG
Gln
>WENV180146253
OAUF01000077
436206
Bacteroidota
TTG
Gln
>WENV180146530
OAUF01000639
20893
Bacteroidota
GGA
Ser
>WENV180146527
OAUF01000627
20893
Bacteroidota
GGA
Ser
>WENV180146303
OAUF01000124
338124
Bacteroidota
CCG
Arg
>WENV180146604
OAUF01001233
235203
Bacteroidota
TTT
Lys
>WENV180146162
OAUF01000009
238121
Bacteroidota
CTT
Lys
>WENV180146161
OAUF01000009
238121
Bacteroidota
CTT
Lys
>WENV180146587
OAUF01001053
126641
Bacteroidota
TAC
Val
>WENV180146586
OAUF01001053
126641
Bacteroidota
TAC
Val
>WENV180146679
OAUF01002555
338132
Bacteroidota
GCA
Cys
>WENV180146542
OAUF01000724
338132
Bacteroidota
GCA
Cys
>WENV180146498
OAUF01000519
338132
Bacteroidota
GCA
Cys
>WENV180146203
OAUF01000019
338132
Bacteroidota
GCA
Cys
>WENV180146375
OAUF01000233
193809
Bacteroidota
CAT
Met
>WENV180146681
OAUF01002580
58714
Bacteroidota
CAA
Leu
>WENV180146559
OAUF01000864
301449
Bacteroidota
CGG
Pro
>WENV180146142
OAUF01000001
301449
Bacteroidota
CGG
Pro
>WENV180146227
OAUF01000043
144933
Bacteroidota
TCT
Arg
>WENV180146212
OAUF01000034
144933
Bacteroidota
TCT
Arg
>WENV180146306
OAUF01000134
141414
Bacteroidota
GGG
Pro
>WENV180146249
OAUF01000069
141414
Bacteroidota
GGG
Pro
>WENV180146290
OAUF01000110
144656
Bacteroidota
GTG
His
>WENV180146491
OAUF01000505
235207
Bacteroidota
CAT
Met
>WENV180146831
OAUF01027998
144659
Bacteroidota
GTG
His
>WENV180146612
OAUF01001309
235180
Bacteroidota
CCA
Trp
>WENV180146846
OAUF01036268
80607
Bacteroidota
GTA
Tyr
>WENV180146645
OAUF01001873
80607
Bacteroidota
GTA
Tyr
>WENV180146344
OAUF01000175
80607
Bacteroidota
GTA
Tyr
>WENV180146211
OAUF01000032
80607
Bacteroidota
GTA
Tyr
>WENV180146200
OAUF01000016
113604
Bacteroidota
>WENV180146197
OAUF01000016
113604
Bacteroidota
>WENV180146202
OAUF01000018
16999
Bacteroidota
GGA
Ser
>WENV180146389
OAUF01000256
80614
Bacteroidota
>WENV180146242
OAUF01000057
80614
Bacteroidota
>WENV180146373
OAUF01000228
144590
Bacteroidota
GTT
Asn
>WENV180146372
OAUF01000228
144590
Bacteroidota
GTT
Asn
>WENV180146462
OAUF01000404
95559
Bacteroidota
TAG
Leu
>WENV180146268
OAUF01000096
144655
Bacteroidota
GGC
Ala
>WENV180146721
OAUF01003927
338164
Bacteroidota
TTC
Glu
>WENV180146325
OAUF01000153
95875
Bacteroidota
TAG
Leu
>WENV180146213
OAUF01000034
240012
Bacteroidota
CCC
Gly
>WENV180146418
OAUF01000328
44852
Bacteroidota
TAA
Leu
>WENV180146729
OAUF01004746
147439
Bacteroidota
TCT
Arg
>WENV180146758
OAUF01006370
411550
Bacteroidota
CTG
Gln
>WENV180146657
OAUF01002001
338165
Bacteroidota
GGT
Thr
>WENV180146305
OAUF01000132
19528
Bacteroidota
GGA
Ser
>WENV180146665
OAUF01002208
425638
Bacteroidota
CTG
Gln
>WENV180146378
OAUF01000236
425638
Bacteroidota
CTG
Gln
>WENV180146250
OAUF01000069
425638
Bacteroidota
CTG
Gln
>WENV180146599
OAUF01001174
239647
Bacteroidota
TTT
Lys
>WENV180146433
OAUF01000363
239647
Bacteroidota
TTT
Lys
>WENV180146577
OAUF01000970
19317
Bacteroidota
GGA
Ser
>WENV180146637
OAUF01001694
185921
Bacteroidota
GTC
Asp
>WENV180146426
OAUF01000355
185921
Bacteroidota
GTC
Asp
>WENV180146422
OAUF01000344
23696
Bacteroidota
GCT
Ser
>WENV180146262
OAUF01000085
23696
Bacteroidota
GCT
Ser
>WENV180146576
OAUF01000970
55270
Bacteroidota
TGA
Ser
>WENV180146557
OAUF01000849
55270
Bacteroidota
TGA
Ser
>WENV180146435
OAUF01000376
55270
Bacteroidota
TGA
Ser
>WENV180146432
OAUF01000362
55270
Bacteroidota
TGA
Ser
>WENV180146302
OAUF01000121
55270
Bacteroidota
TGA
Ser
>WENV180146289
OAUF01000110
55270
Bacteroidota
TGA
Ser
>WENV180146345
OAUF01000176
16224
Bacteroidota
GGA
Ser
>WENV180146492
OAUF01000508
16220
Bacteroidota
GGA
Ser
>WENV180146600
OAUF01001186
338125
Bacteroidota
CCT
Arg
>WENV180146387
OAUF01000252
235129
Bacteroidota
GCC
Gly
>WENV180146385
OAUF01000252
235129
Bacteroidota
GCC
Gly
>WENV180146147
OAUF01000003
235129
Bacteroidota
GCC
Gly
>WENV180146488
OAUF01000473
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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