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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180180511
OAWK01017911
270475
Bacillota
GAA
Phe
>WENV180180427
OAWK01000233
24650
Bacillota
TAA
Leu
>WENV180180346
OAWK01000080
243647
Bacillota
TTT
Lys
>WENV180180354
OAWK01000080
243647
Bacillota
TTT
Lys
>WENV180180360
OAWK01000098
243647
Bacillota
TTT
Lys
>WENV180180458
OAWK01001878
235519
Bacillota
TAC
Val
>WENV180180304
OAWK01000048
16842
Bacillota
CGA
Ser
>WENV180180350
OAWK01000080
235693
Bacillota
GGT
Thr
>WENV180180412
OAWK01000210
267649
Bacillota
TAC
Val
>WENV180180282
OAWK01000037
267649
Bacillota
TAC
Val
>WENV180180280
OAWK01000037
267649
Bacillota
TAC
Val
>WENV180180498
OAWK01013992
347827
Bacillota
TTC
Glu
>WENV180180509
OAWK01017608
235137
Bacillota
TGC
Ala
>WENV180180492
OAWK01010179
338143
Bacillota
CTC
Glu
>WENV180180465
OAWK01002812
147758
Bacillota
CGG
Pro
>WENV180180467
OAWK01003112
238175
Bacillota
CGT
Thr
>WENV180180425
OAWK01000233
144668
Bacillota
GTC
Asp
>WENV180180411
OAWK01000210
144668
Bacillota
GTC
Asp
>WENV180180264
OAWK01000028
16834
Bacillota
GCT
Ser
>WENV180180481
OAWK01006958
268272
Bacillota
TGC
Ala
>WENV180180466
OAWK01003112
339151
Bacillota
TTC
Glu
>WENV180180224
OAWK01000011
114002
Bacillota
CAA
Leu
>WENV180180515
OAWK01020740
8090
Bacillota
GGA
Ser
>WENV180180223
OAWK01000011
37437
Bacillota
TAA
Leu
>WENV180180472
OAWK01005144
339935
Bacillota
GTT
Asn
>WENV180180406
OAWK01000172
243612
Bacillota
TAC
Val
>WENV180180233
OAWK01000014
147135
Bacillota
ACG
Arg
>WENV180180237
OAWK01000014
342895
Bacillota
CAT
Met
>WENV180180450
OAWK01000871
412387
Bacillota
GCA
Cys
>WENV180180483
OAWK01007099
16440
Bacillota
CGA
Ser
>WENV180180299
OAWK01000048
250349
Bacillota
GAA
Phe
>WENV180180220
OAWK01000011
250349
Bacillota
GAA
Phe
>WENV180180494
OAWK01010247
59296
Bacillota
AAG
Leu
>WENV180180417
OAWK01000210
235127
Bacillota
TTT
Lys
>WENV180180402
OAWK01000164
235127
Bacillota
TTT
Lys
>WENV180180298
OAWK01000048
235197
Bacillota
GTC
Asp
>WENV180180219
OAWK01000011
235197
Bacillota
GTC
Asp
>WENV180180484
OAWK01007765
342664
Bacillota
>WENV180180399
OAWK01000164
147674
Bacillota
TCT
Arg
>WENV180180460
OAWK01001878
101373
Bacillota
TAG
Leu
>WENV180180358
OAWK01000098
243613
Bacillota
GTG
His
>WENV180180468
OAWK01003381
144672
Bacillota
TCT
Arg
>WENV180180469
OAWK01003590
238493
Bacillota
CGC
Ala
>WENV180180485
OAWK01008040
412403
Bacillota
CCC
Gly
>WENV180180351
OAWK01000080
152491
Bacillota
CAT
Met
>WENV180180482
OAWK01006971
347434
Bacillota
CTC
Glu
>WENV180180309
OAWK01000053
413657
Bacillota
CCC
Gly
>WENV180180459
OAWK01001878
253547
Bacillota
TTT
Lys
>WENV180180359
OAWK01000098
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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