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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180296284
OBJA01000166
416630
Bacillota
GCC
Gly
>WENV180297474
OBJA01034467
359525
Bacillota
>WENV180296277
OBJA01000163
353391
Bacillota
GCC
Gly
>WENV180298036
OBJA01147877
148104
Bacillota
CAT
Met
>WENV180298994
OBJA01859882
258317
Bacillota
TTG
Gln
>WENV180297742
OBJA01076313
268272
Bacillota
TGC
Ala
>WENV180296207
OBJA01000067
360768
Bacillota
GTT
Asn
>WENV180296793
OBJA01002735
47016
Bacillota
GGA
Ser
>WENV180298666
OBJA01513975
104576
Bacillota
TAG
Leu
>WENV180297099
OBJA01010184
263765
Bacillota
TAC
Val
>WENV180298024
OBJA01142998
353290
Bacillota
GCC
Gly
>WENV180297476
OBJA01034467
154748
Bacillota
GTC
Asp
>WENV180296512
OBJA01000728
426339
Bacillota
GCA
Cys
>WENV180298730
OBJA01567967
258997
Bacillota
CTT
Lys
>WENV180298630
OBJA01484333
341997
Bacillota
GTT
Asn
>WENV180297473
OBJA01034467
349442
Bacillota
GTT
Asn
>WENV180298957
OBJA01826468
341971
Bacillota
GCC
Gly
>WENV180298025
OBJA01142998
357939
Bacillota
GCA
Cys
>WENV180296470
OBJA01000612
254352
Bacillota
GTG
His
>WENV180298001
OBJA01137606
420471
Bacillota
TCC
Gly
>WENV180298791
OBJA01616758
237704
Bacillota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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