This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.148104 (8 seq.)
>W1711503600
MKTT01000081
Planctomycetota
Planctomycetales bacterium 71-10 [MKTT]
82408
82484
+
Pro
GGG
[ENA]
¡û
>C171089079
CP019082
Planctomycetota
Paludisphaera borealis PX4 [CP019082]
1978773
1978848
+
Pro
GGG
-
¡û
>W2010495183
JAALCR010000001
Planctomycetota
Paludisphaera sp. JC665 [JAALCR]
581598
581674
+
Pro
GGG
[ENA]
¡û
>W2010499394
JAALJH010000009
Planctomycetota
Aquisphaera sp. JC669 [JAALJH]
106239
106163
-
Pro
GGG
[ENA]
¡û
>W2010499442
JAALJI010000007
Planctomycetota
Paludisphaera sp. JC670 [JAALJI]
68463
68388
-
Pro
GGG
[ENA]
¡û
>W2110637405
JAHPZK010000001
Planctomycetota
Paludisphaera sp. JC747 [JAHPZK]
2255
2179
-
Pro
GGG
[ENA]
¡û
>C241070999
CP042997
Planctomycetota
Aquisphaera giovannonii OJF2 [CP042997]
3485342
3485266
-
Pro
GGG
-
¡û
>C161033461
CP011273
Planctomycetota
Planctomyces sp. SH-PL62 [CP011273]
1162912
1162837
-
Pro
GGG
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK