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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180443278
OBWY01003591
235146
Actinomycetota
CGT
Thr
>WENV180443024
OBWY01000984
235347
Actinomycetota
GGC
Ala
>WENV180443025
OBWY01000984
235347
Actinomycetota
GGC
Ala
>WENV180443813
OBWY01083992
144589
Actinomycetota
ACG
Arg
>WENV180443156
OBWY01002157
201717
Actinomycetota
CTT
Lys
>WENV180443349
OBWY01005334
201717
Actinomycetota
CTT
Lys
>WENV180443123
OBWY01001678
144600
Actinomycetota
TGG
Pro
>WENV180442932
OBWY01000516
273786
Actinomycetota
CGT
Thr
>WENV180443318
OBWY01004507
158720
Actinomycetota
ACG
Arg
>WENV180443317
OBWY01004507
158720
Actinomycetota
ACG
Arg
>WENV180443097
OBWY01001457
158720
Actinomycetota
ACG
Arg
>WENV180443096
OBWY01001457
158720
Actinomycetota
ACG
Arg
>WENV180443557
OBWY01014303
145346
Actinomycetota
CTT
Lys
>WENV180443194
OBWY01002509
144826
Actinomycetota
GGG
Pro
>WENV180442983
OBWY01000688
23370
Actinomycetota
GCT
Ser
>WENV180443152
OBWY01002089
174149
Actinomycetota
GAT
Ile
>WENV180443525
OBWY01011386
338239
Actinomycetota
TTC
Glu
>WENV180443237
OBWY01002810
338239
Actinomycetota
TTC
Glu
>WENV180443153
OBWY01002089
235174
Actinomycetota
TGC
Ala
>WENV180442891
OBWY01000378
235174
Actinomycetota
TGC
Ala
>WENV180443262
OBWY01003181
235101
Actinomycetota
TTT
Lys
>WENV180443192
OBWY01002464
235101
Actinomycetota
TTT
Lys
>WENV180443417
OBWY01007596
121510
Actinomycetota
TAA
Leu
>WENV180443257
OBWY01003113
356045
Actinomycetota
GAC
Val
>WENV180443060
OBWY01001183
145423
Actinomycetota
TCT
Arg
>WENV180443019
OBWY01000957
145345
Actinomycetota
TAC
Val
>WENV180443555
OBWY01013912
235199
Actinomycetota
CAC
Val
>WENV180443258
OBWY01003113
235199
Actinomycetota
CAC
Val
>WENV180443423
OBWY01007928
44862
Actinomycetota
CGA
Ser
>WENV180443358
OBWY01005650
44862
Actinomycetota
CGA
Ser
>WENV180443289
OBWY01003762
198659
Actinomycetota
TAC
Val
>WENV180443560
OBWY01014391
367535
Actinomycetota
CTG
Gln
>WENV180443222
OBWY01002696
367535
Actinomycetota
CTG
Gln
>WENV180443378
OBWY01006439
413665
Actinomycetota
TTG
Gln
>WENV180443345
OBWY01005180
413665
Actinomycetota
TTG
Gln
>WENV180443266
OBWY01003261
413665
Actinomycetota
TTG
Gln
>WENV180443109
OBWY01001525
45154
Actinomycetota
TGA
Ser
>WENV180443746
OBWY01052131
235849
Actinomycetota
CCT
Arg
>WENV180443464
OBWY01008763
254857
Actinomycetota
CCG
Arg
>WENV180443355
OBWY01005539
254857
Actinomycetota
CCG
Arg
>WENV180443148
OBWY01001988
254857
Actinomycetota
CCG
Arg
>WENV180442982
OBWY01000688
144700
Actinomycetota
CAT
Met
>WENV180443043
OBWY01001139
44942
Actinomycetota
TGA
Ser
>WENV180443147
OBWY01001965
238473
Actinomycetota
GTG
His
>WENV180443559
OBWY01014391
295695
Actinomycetota
CTC
Glu
>WENV180443221
OBWY01002696
295695
Actinomycetota
CTC
Glu
>WENV180443098
OBWY01001469
295695
Actinomycetota
CTC
Glu
>WENV180443100
OBWY01001485
98279
Actinomycetota
GTA
Tyr
>WENV180443099
OBWY01001469
338148
Actinomycetota
CTG
Gln
>WENV180443740
OBWY01051069
95687
Actinomycetota
TAG
Leu
>WENV180443642
OBWY01026862
235148
Actinomycetota
GTT
Asn
>WENV180443254
OBWY01003101
235148
Actinomycetota
GTT
Asn
>WENV180443182
OBWY01002335
235148
Actinomycetota
GTT
Asn
>WENV180443181
OBWY01002335
235148
Actinomycetota
GTT
Asn
>WENV180443121
OBWY01001636
235148
Actinomycetota
GTT
Asn
>WENV180443465
OBWY01008777
53078
Actinomycetota
GGA
Ser
>WENV180443113
OBWY01001573
53078
Actinomycetota
GGA
Ser
>WENV180443419
OBWY01007688
144825
Actinomycetota
CAT
Met
>WENV180443346
OBWY01005219
144825
Actinomycetota
CAT
Met
>WENV180443276
OBWY01003512
145347
Actinomycetota
CAA
Leu
>WENV180442980
OBWY01000680
119508
Actinomycetota
TAA
Leu
>WENV180443382
OBWY01006573
235348
Actinomycetota
CCT
Arg
>WENV180443195
OBWY01002519
235348
Actinomycetota
CCT
Arg
>WENV180443413
OBWY01007439
37521
Actinomycetota
GCT
Ser
>WENV180443339
OBWY01005105
16467
Actinomycetota
GCT
Ser
>WENV180443354
OBWY01005491
411554
Actinomycetota
CCC
Gly
>WENV180443308
OBWY01004257
113601
Actinomycetota
TAG
Leu
>WENV180443277
OBWY01003591
113601
Actinomycetota
TAG
Leu
>WENV180442933
OBWY01000516
113601
Actinomycetota
TAG
Leu
>WENV180443224
OBWY01002725
144595
Actinomycetota
CAA
Leu
>WENV180443122
OBWY01001678
144595
Actinomycetota
CAA
Leu
>WENV180443219
OBWY01002651
145343
Actinomycetota
GGG
Pro
>WENV180443223
OBWY01002697
431657
Actinomycetota
CCC
Gly
>WENV180442989
OBWY01000737
235149
Actinomycetota
CCT
Arg
>WENV180443383
OBWY01006607
145269
Actinomycetota
CAT
Met
>WENV180443307
OBWY01004257
235121
Actinomycetota
CGT
Thr
>WENV180443172
OBWY01002256
144635
Actinomycetota
TGG
Pro
>WENV180443310
OBWY01004323
119485
Actinomycetota
TAA
Leu
>WENV180443770
OBWY01062951
429234
Actinomycetota
CTG
Gln
>WENV180443330
OBWY01004930
45852
Actinomycetota
CGA
Ser
>WENV180443487
OBWY01009635
80622
Actinomycetota
CAG
Leu
>WENV180443240
OBWY01002913
80622
Actinomycetota
CAG
Leu
>WENV180443275
OBWY01003507
16222
Actinomycetota
GAG
Leu
>WENV180443210
OBWY01002635
235173
Actinomycetota
GGC
Ala
>WENV180442892
OBWY01000378
235173
Actinomycetota
GGC
Ala
>WENV180443564
OBWY01015184
44928
Actinomycetota
TGA
Ser
>WENV180443566
OBWY01015495
243162
Actinomycetota
GTT
Asn
>WENV180443539
OBWY01013144
243162
Actinomycetota
GTT
Asn
>WENV180443175
OBWY01002281
144660
Actinomycetota
TAC
Val
>WENV180443414
OBWY01007439
411599
Actinomycetota
TTG
Gln
>WENV180442981
OBWY01000688
95593
Actinomycetota
>WENV180443171
OBWY01002245
144823
Actinomycetota
TCT
Arg
>WENV180443238
OBWY01002837
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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