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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180452649
OBXK01000084
235146
Actinomycetota
CGT
Thr
>WENV180452712
OBXK01000163
235347
Actinomycetota
GGC
Ala
>WENV180452713
OBXK01000163
235347
Actinomycetota
GGC
Ala
>WENV180452564
OBXK01000022
166493
Actinomycetota
CTT
Lys
>WENV180452611
OBXK01000051
166493
Actinomycetota
CTT
Lys
>WENV180452775
OBXK01000339
235153
Actinomycetota
CCT
Arg
>WENV180452612
OBXK01000052
16400
Actinomycetota
GAG
Leu
>WENV180452714
OBXK01000163
144600
Actinomycetota
TGG
Pro
>WENV180452551
OBXK01000012
235194
Actinomycetota
GTG
His
>WENV180452743
OBXK01000238
158720
Actinomycetota
ACG
Arg
>WENV180452742
OBXK01000238
158720
Actinomycetota
ACG
Arg
>WENV180452555
OBXK01000016
158720
Actinomycetota
ACG
Arg
>WENV180452651
OBXK01000087
238476
Actinomycetota
CAC
Val
>WENV180452609
OBXK01000051
238476
Actinomycetota
CAC
Val
>WENV180452867
OBXK01000568
245301
Actinomycetota
GCC
Gly
>WENV180452866
OBXK01000568
245301
Actinomycetota
GCC
Gly
>WENV180452864
OBXK01000568
245301
Actinomycetota
GCC
Gly
>WENV180452745
OBXK01000240
411601
Actinomycetota
CCC
Gly
>WENV180452781
OBXK01000340
144826
Actinomycetota
GGG
Pro
>WENV180452653
OBXK01000087
144826
Actinomycetota
GGG
Pro
>WENV180452674
OBXK01000105
23370
Actinomycetota
GCT
Ser
>WENV180452556
OBXK01000016
147146
Actinomycetota
ACG
Arg
>WENV180452586
OBXK01000035
338239
Actinomycetota
TTC
Glu
>WENV180452571
OBXK01000025
338239
Actinomycetota
TTC
Glu
>WENV180452904
OBXK01001272
162208
Actinomycetota
TAC
Val
>WENV180452547
OBXK01000010
16219
Actinomycetota
GCT
Ser
>WENV180452678
OBXK01000110
235174
Actinomycetota
TGC
Ala
>WENV180452598
OBXK01000037
235174
Actinomycetota
TGC
Ala
>WENV180452718
OBXK01000167
235101
Actinomycetota
TTT
Lys
>WENV180452563
OBXK01000022
235101
Actinomycetota
TTT
Lys
>WENV180452682
OBXK01000123
121510
Actinomycetota
TAA
Leu
>WENV180452898
OBXK01001112
235848
Actinomycetota
TTT
Lys
>WENV180452900
OBXK01001174
145423
Actinomycetota
TCT
Arg
>WENV180452892
OBXK01000889
153948
Actinomycetota
GGG
Pro
>WENV180452732
OBXK01000203
44855
Actinomycetota
TGA
Ser
>WENV180452549
OBXK01000010
44855
Actinomycetota
TGA
Ser
>WENV180452528
OBXK01000003
145345
Actinomycetota
TAC
Val
>WENV180452779
OBXK01000340
235199
Actinomycetota
CAC
Val
>WENV180452731
OBXK01000203
44862
Actinomycetota
CGA
Ser
>WENV180452711
OBXK01000163
413665
Actinomycetota
TTG
Gln
>WENV180452619
OBXK01000055
413665
Actinomycetota
TTG
Gln
>WENV180452907
OBXK01001542
45154
Actinomycetota
TGA
Ser
>WENV180452893
OBXK01000915
254857
Actinomycetota
CCG
Arg
>WENV180452565
OBXK01000022
254857
Actinomycetota
CCG
Arg
>WENV180452752
OBXK01000265
113703
Actinomycetota
TAG
Leu
>WENV180452673
OBXK01000105
144700
Actinomycetota
CAT
Met
>WENV180452894
OBXK01000946
238473
Actinomycetota
GTG
His
>WENV180452690
OBXK01000134
144636
Actinomycetota
GAT
Ile
>WENV180452688
OBXK01000134
144636
Actinomycetota
GAT
Ile
>WENV180452729
OBXK01000202
243671
Actinomycetota
CTC
Glu
>WENV180452593
OBXK01000036
243671
Actinomycetota
CTC
Glu
>WENV180452548
OBXK01000010
45147
Actinomycetota
CGA
Ser
>WENV180452928
OBXK01002840
98279
Actinomycetota
GTA
Tyr
>WENV180452730
OBXK01000202
338148
Actinomycetota
CTG
Gln
>WENV180452594
OBXK01000036
338148
Actinomycetota
CTG
Gln
>WENV180452687
OBXK01000131
235148
Actinomycetota
GTT
Asn
>WENV180452529
OBXK01000003
237792
Actinomycetota
CCT
Arg
>WENV180452679
OBXK01000114
113702
Actinomycetota
TAA
Leu
>WENV180452589
OBXK01000035
144825
Actinomycetota
CAT
Met
>WENV180452854
OBXK01000461
338139
Actinomycetota
GTT
Asn
>WENV180452853
OBXK01000461
338139
Actinomycetota
GTT
Asn
>WENV180452590
OBXK01000035
235348
Actinomycetota
CCT
Arg
>WENV180452595
OBXK01000036
237794
Actinomycetota
CCG
Arg
>WENV180452592
OBXK01000036
411554
Actinomycetota
CCC
Gly
>WENV180452648
OBXK01000084
113601
Actinomycetota
TAG
Leu
>WENV180452707
OBXK01000157
144595
Actinomycetota
CAA
Leu
>WENV180452683
OBXK01000123
144595
Actinomycetota
CAA
Leu
>WENV180452903
OBXK01001245
235149
Actinomycetota
CCT
Arg
>WENV180452754
OBXK01000268
414234
Actinomycetota
CTG
Gln
>WENV180452749
OBXK01000260
153915
Actinomycetota
ACG
Arg
>WENV180452748
OBXK01000260
153915
Actinomycetota
ACG
Arg
>WENV180452890
OBXK01000815
147225
Actinomycetota
CAA
Leu
>WENV180452751
OBXK01000265
235121
Actinomycetota
CGT
Thr
>WENV180452647
OBXK01000084
235121
Actinomycetota
CGT
Thr
>WENV180452567
OBXK01000022
47164
Actinomycetota
GGA
Ser
>WENV180452591
OBXK01000036
47164
Actinomycetota
GGA
Ser
>WENV180452895
OBXK01000995
144635
Actinomycetota
TGG
Pro
>WENV180452840
OBXK01000439
61501
Actinomycetota
CAG
Leu
>WENV180452741
OBXK01000233
17009
Actinomycetota
GAG
Leu
>WENV180452757
OBXK01000273
80622
Actinomycetota
CAG
Leu
>WENV180452746
OBXK01000240
80622
Actinomycetota
CAG
Leu
>WENV180452588
OBXK01000035
147734
Actinomycetota
GTC
Asp
>WENV180452587
OBXK01000035
147734
Actinomycetota
GTC
Asp
>WENV180452573
OBXK01000025
147734
Actinomycetota
GTC
Asp
>WENV180452572
OBXK01000025
147734
Actinomycetota
GTC
Asp
>WENV180452661
OBXK01000101
158513
Actinomycetota
TGG
Pro
>WENV180452574
OBXK01000025
163948
Actinomycetota
CAT
Met
>WENV180452865
OBXK01000568
412834
Actinomycetota
GCA
Cys
>WENV180452618
OBXK01000055
235173
Actinomycetota
GGC
Ala
>WENV180452610
OBXK01000051
235173
Actinomycetota
GGC
Ala
>WENV180452960
OBXK01012520
243162
Actinomycetota
GTT
Asn
>WENV180452617
OBXK01000055
243162
Actinomycetota
GTT
Asn
>WENV180452543
OBXK01000009
144660
Actinomycetota
TAC
Val
>WENV180452672
OBXK01000105
95593
Actinomycetota
>WENV180452545
OBXK01000010
95593
Actinomycetota
>WENV180452578
OBXK01000029
144823
Actinomycetota
TCT
Arg
>WENV180452552
OBXK01000012
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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