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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180490550
OBZU01003117
236176
Bacillota
GTG
His
>WENV180490641
OBZU01009044
58873
Bacillota
CAA
Leu
>WENV180490457
OBZU01000845
144612
Bacillota
TCT
Arg
>WENV180490579
OBZU01004256
154063
Bacillota
CGG
Pro
>WENV180490566
OBZU01003633
338714
Bacillota
CTC
Glu
>WENV180490573
OBZU01003959
145609
Bacillota
TCG
Arg
>WENV180490598
OBZU01005202
145607
Bacillota
ACG
Arg
>WENV180490831
OBZU01055080
235154
Bacillota
GTT
Asn
>WENV180490553
OBZU01003117
113680
Bacillota
TAG
Leu
>WENV180490551
OBZU01003117
338409
Bacillota
TTG
Gln
>WENV180490769
OBZU01029123
235137
Bacillota
TGC
Ala
>WENV180490461
OBZU01000886
338713
Bacillota
CCC
Gly
>WENV180490695
OBZU01014132
144668
Bacillota
GTC
Asp
>WENV180490808
OBZU01038823
429429
Bacillota
CCA
Trp
>WENV180490778
OBZU01031527
145606
Bacillota
GTC
Asp
>WENV180490697
OBZU01014132
41154
Bacillota
TAA
Leu
>WENV180490347
OBZU01000129
235117
Bacillota
TAC
Val
>WENV180490568
OBZU01003688
411792
Bacillota
GCA
Cys
>WENV180490552
OBZU01003117
236023
Bacillota
TTT
Lys
>WENV180490349
OBZU01000129
235079
Bacillota
GAA
Phe
>WENV180490804
OBZU01037335
149041
Bacillota
GTC
Asp
>WENV180490350
OBZU01000129
271471
Bacillota
GCC
Gly
>WENV180490346
OBZU01000129
271471
Bacillota
GCC
Gly
>WENV180490784
OBZU01032425
95736
Bacillota
GAG
Leu
>WENV180490462
OBZU01000886
235499
Bacillota
GGT
Thr
>WENV180490766
OBZU01029037
10680
Bacillota
GGA
Ser
>WENV180490557
OBZU01003117
236177
Bacillota
CTT
Lys
>WENV180490706
OBZU01015182
145608
Bacillota
CCT
Arg
>WENV180490480
OBZU01001134
419639
Bacillota
GCA
Cys
>WENV180490474
OBZU01001094
23463
Bacillota
GGA
Ser
>WENV180490529
OBZU01002366
1074
Bacillota
>WENV180490656
OBZU01010518
59296
Bacillota
AAG
Leu
>WENV180490597
OBZU01005202
18547
Bacillota
GCT
Ser
>WENV180490549
OBZU01003117
286963
Bacillota
CTT
Lys
>WENV180490805
OBZU01037735
235127
Bacillota
TTT
Lys
>WENV180490736
OBZU01019054
342664
Bacillota
>WENV180490786
OBZU01034071
147674
Bacillota
TCT
Arg
>WENV180490524
OBZU01002352
235638
Bacillota
GAA
Phe
>WENV180490688
OBZU01013638
144672
Bacillota
TCT
Arg
>WENV180490548
OBZU01003117
145383
Bacillota
TCT
Arg
>WENV180490556
OBZU01003117
145383
Bacillota
TCT
Arg
>WENV180490623
OBZU01006963
353527
Bacillota
TTC
Glu
>WENV180490649
OBZU01009760
243098
Bacillota
GGT
Thr
>WENV180490546
OBZU01003117
242988
Bacillota
TGG
Pro
>WENV180490536
OBZU01002702
344240
Bacillota
GCC
Gly
>WENV180490479
OBZU01001134
344240
Bacillota
GCC
Gly
>WENV180490477
OBZU01001134
196632
Bacillota
GTC
Asp
>WENV180490299
OBZU01000065
420471
Bacillota
TCC
Gly
>WENV180490567
OBZU01003654
292012
Bacillota
TGC
Ala
>WENV180490478
OBZU01001134
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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