This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180561261
OCKX01076136
196621
Bacillota
GTC
Asp
>WENV180561107
OCKX01010382
309417
Bacillota
GGC
Ala
>WENV180561147
OCKX01017677
37213
Bacillota
TGA
Ser
>WENV180561156
OCKX01020619
144612
Bacillota
TCT
Arg
>WENV180561238
OCKX01065522
144612
Bacillota
TCT
Arg
>WENV180561069
OCKX01004750
44854
Bacillota
TGA
Ser
>WENV180561189
OCKX01031137
144577
Bacillota
GAT
Ile
>WENV180561243
OCKX01067341
304022
Bacillota
GCC
Gly
>WENV180561164
OCKX01023669
304022
Bacillota
GCC
Gly
>WENV180561154
OCKX01020108
304022
Bacillota
GCC
Gly
>WENV180561142
OCKX01016822
304022
Bacillota
GCC
Gly
>WENV180561052
OCKX01003787
302150
Bacillota
TAC
Val
>WENV180561171
OCKX01025233
307003
Bacillota
TGC
Ala
>WENV180561255
OCKX01075935
238910
Bacillota
CTT
Lys
>WENV180561209
OCKX01045729
340802
Bacillota
TTG
Gln
>WENV180561245
OCKX01067423
281701
Bacillota
TGC
Ala
>WENV180561199
OCKX01039162
429429
Bacillota
CCA
Trp
>WENV180561182
OCKX01029700
41154
Bacillota
TAA
Leu
>WENV180561032
OCKX01002835
11034
Bacillota
GGA
Ser
>WENV180561234
OCKX01062015
247057
Bacillota
TGC
Ala
>WENV180561122
OCKX01012826
247057
Bacillota
TGC
Ala
>WENV180561153
OCKX01020108
235079
Bacillota
GAA
Phe
>WENV180561188
OCKX01031137
235087
Bacillota
TGC
Ala
>WENV180561260
OCKX01076135
338149
Bacillota
CTC
Glu
>WENV180561017
OCKX01001519
245298
Bacillota
CGG
Pro
>WENV180561051
OCKX01003787
144599
Bacillota
GTC
Asp
>WENV180561222
OCKX01054606
100326
Bacillota
GTA
Tyr
>WENV180561143
OCKX01017344
144610
Bacillota
GTG
His
>WENV180561016
OCKX01001519
411547
Bacillota
CTG
Gln
>WENV180561070
OCKX01004750
4624
Bacillota
GCT
Ser
>WENV180561151
OCKX01019855
235095
Bacillota
GGT
Thr
>WENV180561026
OCKX01002120
411549
Bacillota
TTG
Gln
>WENV180561161
OCKX01023194
148188
Bacillota
CCG
Arg
>WENV180561088
OCKX01008311
243401
Bacillota
CGT
Thr
>WENV180561031
OCKX01002685
235124
Bacillota
TGG
Pro
>WENV180561220
OCKX01053339
338129
Bacillota
TGT
Thr
>WENV180561102
OCKX01008835
144583
Bacillota
ACG
Arg
>WENV180561085
OCKX01007456
144621
Bacillota
GTT
Asn
>WENV180561141
OCKX01016216
58712
Bacillota
CAG
Leu
>WENV180561113
OCKX01011738
245296
Bacillota
CCC
Gly
>WENV180561041
OCKX01003193
272992
Bacillota
CTT
Lys
>WENV180561217
OCKX01050858
415519
Bacillota
GCA
Cys
>WENV180561000
OCKX01000930
144594
Bacillota
CAC
Val
>WENV180561146
OCKX01017344
114075
Bacillota
TAG
Leu
>WENV180561135
OCKX01015270
384950
Bacillota
GCC
Gly
>WENV180560947
OCKX01000059
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK