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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180575334
OCLY01000061
235097
Bacteroidota
TTT
Lys
>WENV180575408
OCLY01000130
235097
Bacteroidota
TTT
Lys
>WENV180575453
OCLY01000198
235097
Bacteroidota
TTT
Lys
>WENV180575467
OCLY01000226
235097
Bacteroidota
TTT
Lys
>WENV180575247
OCLY01000014
235102
Bacteroidota
CGT
Thr
>WENV180575430
OCLY01000167
235102
Bacteroidota
CGT
Thr
>WENV180575301
OCLY01000041
144657
Bacteroidota
CGG
Pro
>WENV180575502
OCLY01000320
243025
Bacteroidota
CAT
Met
>WENV180575464
OCLY01000222
338155
Bacteroidota
CTC
Glu
>WENV180575604
OCLY01000716
338155
Bacteroidota
CTC
Glu
>WENV180575732
OCLY01006068
338155
Bacteroidota
CTC
Glu
>WENV180575370
OCLY01000084
339341
Bacteroidota
GGT
Thr
>WENV180575309
OCLY01000046
343138
Bacteroidota
CCT
Arg
>WENV180575220
OCLY01000007
58715
Bacteroidota
GAG
Leu
>WENV180575734
OCLY01006159
46165
Bacteroidota
TGA
Ser
>WENV180575657
OCLY01001732
17323
Bacteroidota
GGA
Ser
>WENV180575497
OCLY01000305
338486
Bacteroidota
CAT
Met
>WENV180575316
OCLY01000050
338486
Bacteroidota
CAT
Met
>WENV180575863
OCLY01018390
415410
Bacteroidota
TTG
Gln
>WENV180575567
OCLY01000542
415410
Bacteroidota
TTG
Gln
>WENV180575440
OCLY01000182
415410
Bacteroidota
TTG
Gln
>WENV180575257
OCLY01000023
415410
Bacteroidota
TTG
Gln
>WENV180575298
OCLY01000041
59689
Bacteroidota
CAG
Leu
>WENV180575219
OCLY01000007
59689
Bacteroidota
CAG
Leu
>WENV180575357
OCLY01000077
20893
Bacteroidota
GGA
Ser
>WENV180575304
OCLY01000041
20893
Bacteroidota
GGA
Ser
>WENV180575733
OCLY01006158
344692
Bacteroidota
GGT
Thr
>WENV180575500
OCLY01000316
338124
Bacteroidota
CCG
Arg
>WENV180575355
OCLY01000072
338124
Bacteroidota
CCG
Arg
>WENV180575531
OCLY01000396
235203
Bacteroidota
TTT
Lys
>WENV180575217
OCLY01000007
235203
Bacteroidota
TTT
Lys
>WENV180575364
OCLY01000079
238121
Bacteroidota
CTT
Lys
>WENV180575363
OCLY01000079
238121
Bacteroidota
CTT
Lys
>WENV180575362
OCLY01000079
238121
Bacteroidota
CTT
Lys
>WENV180575457
OCLY01000205
126641
Bacteroidota
TAC
Val
>WENV180575712
OCLY01004454
338132
Bacteroidota
GCA
Cys
>WENV180575478
OCLY01000251
338132
Bacteroidota
GCA
Cys
>WENV180575465
OCLY01000224
338132
Bacteroidota
GCA
Cys
>WENV180575447
OCLY01000194
338132
Bacteroidota
GCA
Cys
>WENV180575361
OCLY01000078
338132
Bacteroidota
GCA
Cys
>WENV180575328
OCLY01000057
338132
Bacteroidota
GCA
Cys
>WENV180575244
OCLY01000014
338132
Bacteroidota
GCA
Cys
>WENV180575365
OCLY01000079
45423
Bacteroidota
TGA
Ser
>WENV180575646
OCLY01001454
193809
Bacteroidota
CAT
Met
>WENV180575607
OCLY01000733
58714
Bacteroidota
CAA
Leu
>WENV180576116
OCLY01138361
301449
Bacteroidota
CGG
Pro
>WENV180575833
OCLY01013995
301449
Bacteroidota
CGG
Pro
>WENV180575620
OCLY01001013
301449
Bacteroidota
CGG
Pro
>WENV180575368
OCLY01000081
301449
Bacteroidota
CGG
Pro
>WENV180575351
OCLY01000070
301449
Bacteroidota
CGG
Pro
>WENV180575333
OCLY01000059
301449
Bacteroidota
CGG
Pro
>WENV180575693
OCLY01003148
144933
Bacteroidota
TCT
Arg
>WENV180575522
OCLY01000377
144933
Bacteroidota
TCT
Arg
>WENV180575307
OCLY01000044
144933
Bacteroidota
TCT
Arg
>WENV180575435
OCLY01000170
144656
Bacteroidota
GTG
His
>WENV180575713
OCLY01004540
235207
Bacteroidota
CAT
Met
>WENV180575510
OCLY01000342
235207
Bacteroidota
CAT
Met
>WENV180575434
OCLY01000169
235207
Bacteroidota
CAT
Met
>WENV180575387
OCLY01000100
144659
Bacteroidota
GTG
His
>WENV180575386
OCLY01000100
144659
Bacteroidota
GTG
His
>WENV180575385
OCLY01000100
144659
Bacteroidota
GTG
His
>WENV180575371
OCLY01000084
235180
Bacteroidota
CCA
Trp
>WENV180575302
OCLY01000041
235180
Bacteroidota
CCA
Trp
>WENV180575718
OCLY01005188
144596
Bacteroidota
GGC
Ala
>WENV180575360
OCLY01000078
144596
Bacteroidota
GGC
Ala
>WENV180576054
OCLY01098470
80607
Bacteroidota
GTA
Tyr
>WENV180575846
OCLY01016378
80607
Bacteroidota
GTA
Tyr
>WENV180575493
OCLY01000290
80607
Bacteroidota
GTA
Tyr
>WENV180575437
OCLY01000171
80607
Bacteroidota
GTA
Tyr
>WENV180575290
OCLY01000034
80607
Bacteroidota
GTA
Tyr
>WENV180575565
OCLY01000521
113604
Bacteroidota
>WENV180575587
OCLY01000614
80614
Bacteroidota
>WENV180575388
OCLY01000100
80614
Bacteroidota
>WENV180575222
OCLY01000007
80614
Bacteroidota
>WENV180575970
OCLY01053308
52358
Bacteroidota
TGA
Ser
>WENV180575698
OCLY01003337
52358
Bacteroidota
TGA
Ser
>WENV180575573
OCLY01000585
52358
Bacteroidota
TGA
Ser
>WENV180575521
OCLY01000372
52358
Bacteroidota
TGA
Ser
>WENV180575481
OCLY01000259
52358
Bacteroidota
TGA
Ser
>WENV180575405
OCLY01000120
52358
Bacteroidota
TGA
Ser
>WENV180575384
OCLY01000098
52358
Bacteroidota
TGA
Ser
>WENV180575292
OCLY01000034
52358
Bacteroidota
TGA
Ser
>WENV180575255
OCLY01000022
52358
Bacteroidota
TGA
Ser
>WENV180575324
OCLY01000052
154643
Bacteroidota
CAT
Met
>WENV180576114
OCLY01138335
144590
Bacteroidota
GTT
Asn
>WENV180575459
OCLY01000212
95559
Bacteroidota
TAG
Leu
>WENV180575392
OCLY01000111
419272
Bacteroidota
CTG
Gln
>WENV180575329
OCLY01000058
419272
Bacteroidota
CTG
Gln
>WENV180575610
OCLY01000761
144655
Bacteroidota
GGC
Ala
>WENV180575311
OCLY01000046
338164
Bacteroidota
TTC
Glu
>WENV180575310
OCLY01000046
338164
Bacteroidota
TTC
Glu
>WENV180575499
OCLY01000312
95875
Bacteroidota
TAG
Leu
>WENV180575422
OCLY01000149
240012
Bacteroidota
CCC
Gly
>WENV180575546
OCLY01000441
44852
Bacteroidota
TAA
Leu
>WENV180575356
OCLY01000073
147439
Bacteroidota
TCT
Arg
>WENV180575414
OCLY01000142
411550
Bacteroidota
CTG
Gln
>WENV180575413
OCLY01000142
411550
Bacteroidota
CTG
Gln
>WENV180575569
OCLY01000556
338165
Bacteroidota
GGT
Thr
>WENV180575896
OCLY01027346
132360
Bacteroidota
GGG
Pro
>WENV180575666
OCLY01002047
132360
Bacteroidota
GGG
Pro
>WENV180575605
OCLY01000718
132360
Bacteroidota
GGG
Pro
>WENV180575532
OCLY01000400
132360
Bacteroidota
GGG
Pro
>WENV180575393
OCLY01000111
132360
Bacteroidota
GGG
Pro
>WENV180575331
OCLY01000058
132360
Bacteroidota
GGG
Pro
>WENV180575533
OCLY01000400
425638
Bacteroidota
CTG
Gln
>WENV180575488
OCLY01000274
425638
Bacteroidota
CTG
Gln
>WENV180575455
OCLY01000201
425638
Bacteroidota
CTG
Gln
>WENV180575254
OCLY01000020
425638
Bacteroidota
CTG
Gln
>WENV180575810
OCLY01012142
239647
Bacteroidota
TTT
Lys
>WENV180575456
OCLY01000203
239647
Bacteroidota
TTT
Lys
>WENV180575848
OCLY01016927
19317
Bacteroidota
GGA
Ser
>WENV180575330
OCLY01000058
19317
Bacteroidota
GGA
Ser
>WENV180575256
OCLY01000022
19317
Bacteroidota
GGA
Ser
>WENV180575417
OCLY01000143
353927
Bacteroidota
TTC
Glu
>WENV180575563
OCLY01000519
185921
Bacteroidota
GTC
Asp
>WENV180575508
OCLY01000340
185921
Bacteroidota
GTC
Asp
>WENV180575438
OCLY01000175
185921
Bacteroidota
GTC
Asp
>WENV180575842
OCLY01015157
146530
Bacteroidota
TGT
Thr
>WENV180576012
OCLY01077415
23696
Bacteroidota
GCT
Ser
>WENV180575480
OCLY01000251
23696
Bacteroidota
GCT
Ser
>WENV180575295
OCLY01000035
414426
Bacteroidota
CTG
Gln
>WENV180575645
OCLY01001418
16224
Bacteroidota
GGA
Ser
>WENV180575627
OCLY01001151
16224
Bacteroidota
GGA
Ser
>WENV180575535
OCLY01000414
16220
Bacteroidota
GGA
Ser
>WENV180575525
OCLY01000386
338125
Bacteroidota
CCT
Arg
>WENV180575369
OCLY01000083
338125
Bacteroidota
CCT
Arg
>WENV180575297
OCLY01000040
338125
Bacteroidota
CCT
Arg
>WENV180575218
OCLY01000007
235129
Bacteroidota
GCC
Gly
>WENV180575529
OCLY01000393
235129
Bacteroidota
GCC
Gly
>WENV180575492
OCLY01000289
235129
Bacteroidota
GCC
Gly
>WENV180575460
OCLY01000215
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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