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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180897407
ODNI01021079
342772
Actinomycetota
CTG
Gln
>WENV180896289
ODNI01000276
16260
Actinomycetota
TGA
Ser
>WENV180896047
ODNI01000041
413566
Actinomycetota
CCC
Gly
>WENV180897428
ODNI01022167
413566
Actinomycetota
CCC
Gly
>WENV180896290
ODNI01000276
10569
Actinomycetota
GCT
Ser
>WENV180897025
ODNI01005330
241401
Actinomycetota
CCA
Trp
>WENV180897870
ODNI01106987
235101
Actinomycetota
TTT
Lys
>WENV180897652
ODNI01049740
235848
Actinomycetota
TTT
Lys
>WENV180896811
ODNI01002438
150473
Actinomycetota
CTC
Glu
>WENV180896986
ODNI01004566
149271
Actinomycetota
CAT
Met
>WENV180896253
ODNI01000241
246015
Actinomycetota
GTG
His
>WENV180896826
ODNI01002521
239204
Actinomycetota
CTT
Lys
>WENV180896825
ODNI01002521
239204
Actinomycetota
CTT
Lys
>WENV180896945
ODNI01003944
237553
Actinomycetota
ACG
Arg
>WENV180897788
ODNI01082309
16223
Actinomycetota
GAG
Leu
>WENV180896609
ODNI01001204
148467
Actinomycetota
CAT
Met
>WENV180896155
ODNI01000143
246299
Actinomycetota
CTT
Lys
>WENV180896154
ODNI01000143
246299
Actinomycetota
CTT
Lys
>WENV180896458
ODNI01000723
235388
Actinomycetota
GTG
His
>WENV180896160
ODNI01000147
246222
Actinomycetota
CCG
Arg
>WENV180897803
ODNI01084921
237792
Actinomycetota
CCT
Arg
>WENV180896607
ODNI01001195
149270
Actinomycetota
GTC
Asp
>WENV180896338
ODNI01000368
149270
Actinomycetota
GTC
Asp
>WENV180896107
ODNI01000097
149270
Actinomycetota
GTC
Asp
>WENV180897597
ODNI01043571
412384
Actinomycetota
CCC
Gly
>WENV180897431
ODNI01022565
45767
Actinomycetota
GGA
Ser
>WENV180897301
ODNI01014093
45767
Actinomycetota
GGA
Ser
>WENV180896891
ODNI01003162
45767
Actinomycetota
GGA
Ser
>WENV180896579
ODNI01001109
45767
Actinomycetota
GGA
Ser
>WENV180896438
ODNI01000656
152190
Actinomycetota
GAT
Ile
>WENV180896726
ODNI01001855
59716
Actinomycetota
CAG
Leu
>WENV180896749
ODNI01002082
246365
Actinomycetota
ACG
Arg
>WENV180896230
ODNI01000219
97120
Actinomycetota
GTA
Tyr
>WENV180897288
ODNI01013200
240124
Actinomycetota
CGT
Thr
>WENV180897029
ODNI01005421
240124
Actinomycetota
CGT
Thr
>WENV180897076
ODNI01006208
235575
Actinomycetota
CTC
Glu
>WENV180896611
ODNI01001211
236216
Actinomycetota
GGC
Ala
>WENV180896499
ODNI01000838
236216
Actinomycetota
GGC
Ala
>WENV180896445
ODNI01000690
236216
Actinomycetota
GGC
Ala
>WENV180896137
ODNI01000130
236216
Actinomycetota
GGC
Ala
>WENV180896136
ODNI01000130
236216
Actinomycetota
GGC
Ala
>WENV180897453
ODNI01025443
155075
Actinomycetota
TCT
Arg
>WENV180897937
ODNI01138534
243162
Actinomycetota
GTT
Asn
>WENV180897677
ODNI01054449
344380
Actinomycetota
GAC
Val
>WENV180897840
ODNI01094399
144660
Actinomycetota
TAC
Val
>WENV180896852
ODNI01002745
412870
Actinomycetota
TCC
Gly
>WENV180896595
ODNI01001149
241408
Actinomycetota
CTT
Lys
>WENV180896824
ODNI01002521
95601
Actinomycetota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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