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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180977459
ODUZ01001001
243647
Bacillota
TTT
Lys
>WENV180977702
ODUZ01003490
178679
Bacillota
CAT
Met
>WENV180977154
ODUZ01000030
16842
Bacillota
CGA
Ser
>WENV180977659
ODUZ01002937
390153
Bacillota
GCC
Gly
>WENV180978380
ODUZ01064399
390153
Bacillota
GCC
Gly
>WENV180978281
ODUZ01039846
409574
Bacillota
TGT
Thr
>WENV180977995
ODUZ01013359
267649
Bacillota
TAC
Val
>WENV180978030
ODUZ01014945
267649
Bacillota
TAC
Val
>WENV180978366
ODUZ01061632
267649
Bacillota
TAC
Val
>WENV180978283
ODUZ01039846
118788
Bacillota
TAG
Leu
>WENV180978426
ODUZ01092171
359540
Bacillota
GTT
Asn
>WENV180978223
ODUZ01030093
389888
Bacillota
GCC
Gly
>WENV180977865
ODUZ01007655
235150
Bacillota
TGC
Ala
>WENV180978307
ODUZ01046837
235137
Bacillota
TGC
Ala
>WENV180978221
ODUZ01030093
308424
Bacillota
TTT
Lys
>WENV180977234
ODUZ01000128
391536
Bacillota
TTC
Glu
>WENV180977761
ODUZ01004576
16834
Bacillota
GCT
Ser
>WENV180978292
ODUZ01041673
444721
Bacillota
TCC
Gly
>WENV180977121
ODUZ01000009
114002
Bacillota
CAA
Leu
>WENV180978225
ODUZ01030093
162028
Bacillota
ACG
Arg
>WENV180977708
ODUZ01003490
113951
Bacillota
GTA
Tyr
>WENV180977235
ODUZ01000128
243612
Bacillota
TAC
Val
>WENV180978360
ODUZ01060669
316443
Bacillota
GTC
Asp
>WENV180978228
ODUZ01030193
155089
Bacillota
CAT
Met
>WENV180978133
ODUZ01020321
147135
Bacillota
ACG
Arg
>WENV180978029
ODUZ01014945
144599
Bacillota
GTC
Asp
>WENV180978143
ODUZ01021027
242848
Bacillota
GAA
Phe
>WENV180977706
ODUZ01003490
242848
Bacillota
GAA
Phe
>WENV180977151
ODUZ01000030
194150
Bacillota
TGG
Pro
>WENV180977871
ODUZ01008046
185292
Bacillota
ACG
Arg
>WENV180978482
ODUZ01143171
235197
Bacillota
GTC
Asp
>WENV180977144
ODUZ01000029
235197
Bacillota
GTC
Asp
>WENV180977327
ODUZ01000334
368876
Bacillota
GCC
Gly
>WENV180977146
ODUZ01000029
368876
Bacillota
GCC
Gly
>WENV180978362
ODUZ01060669
113225
Bacillota
TAG
Leu
>WENV180978427
ODUZ01092171
388132
Bacillota
TTC
Glu
>WENV180978279
ODUZ01039846
235288
Bacillota
TAC
Val
>WENV180977457
ODUZ01001001
243613
Bacillota
GTG
His
>WENV180978282
ODUZ01039846
108675
Bacillota
GTA
Tyr
>WENV180978466
ODUZ01131423
235292
Bacillota
CCA
Trp
>WENV180977240
ODUZ01000128
152491
Bacillota
CAT
Met
>WENV180978280
ODUZ01039846
199895
Bacillota
GTC
Asp
>WENV180977236
ODUZ01000128
273029
Bacillota
TGT
Thr
>WENV180977239
ODUZ01000128
281472
Bacillota
GGT
Thr
>WENV180977153
ODUZ01000030
178024
Bacillota
TCT
Arg
>WENV180977645
ODUZ01002746
315448
Bacillota
GGT
Thr
>WENV180977465
ODUZ01001030
413657
Bacillota
CCC
Gly
>WENV180978352
ODUZ01057255
272488
Bacillota
GAA
Phe
>WENV180977233
ODUZ01000128
287034
Bacillota
GTT
Asn
>WENV180977458
ODUZ01001001
343027
Bacillota
TTG
Gln
>WENV180977710
ODUZ01003514
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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