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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180984582
ODVH01002111
235615
Actinomycetota
TGC
Ala
>WENV180984545
ODVH01000212
147158
Actinomycetota
TTT
Lys
>WENV180984576
ODVH01001677
96217
Actinomycetota
TAG
Leu
>WENV180984538
ODVH01000140
193208
Actinomycetota
CGG
Pro
>WENV180984586
ODVH01003049
147155
Actinomycetota
GTC
Asp
>WENV180984558
ODVH01000952
235606
Actinomycetota
GGT
Thr
>WENV180984578
ODVH01001742
237816
Actinomycetota
GGT
Thr
>WENV180984526
ODVH01000040
413217
Actinomycetota
CCC
Gly
>WENV180984573
ODVH01001430
145272
Actinomycetota
CAT
Met
>WENV180984523
ODVH01000028
152063
Actinomycetota
CAA
Leu
>WENV180984556
ODVH01000637
147157
Actinomycetota
TAC
Val
>WENV180984515
ODVH01000011
145052
Actinomycetota
GAT
Ile
>WENV180984565
ODVH01001171
80900
Actinomycetota
TGA
Ser
>WENV180984587
ODVH01003251
147913
Actinomycetota
TCT
Arg
>WENV180984572
ODVH01001246
339641
Actinomycetota
GAC
Val
>WENV180984529
ODVH01000090
235574
Actinomycetota
TTC
Glu
>WENV180984599
ODVH01006213
239230
Actinomycetota
CCT
Arg
>WENV180984622
ODVH01011510
145065
Actinomycetota
GAT
Ile
>WENV180984570
ODVH01001202
345157
Actinomycetota
CAC
Val
>WENV180984551
ODVH01000389
415620
Actinomycetota
TCC
Gly
>WENV180984589
ODVH01003415
243603
Actinomycetota
ACG
Arg
>WENV180984583
ODVH01002242
147348
Actinomycetota
TAA
Leu
>WENV180984588
ODVH01003336
428901
Actinomycetota
CCC
Gly
>WENV180984625
ODVH01012633
176229
Actinomycetota
CAA
Leu
>WENV180984594
ODVH01004501
235384
Actinomycetota
GTG
His
>WENV180984596
ODVH01004629
372831
Actinomycetota
CTG
Gln
>WENV180984541
ODVH01000178
278330
Actinomycetota
CGC
Ala
>WENV180984611
ODVH01007702
121553
Actinomycetota
TTG
Gln
>WENV180984575
ODVH01001629
235655
Actinomycetota
GTT
Asn
>WENV180984563
ODVH01001073
80899
Actinomycetota
CAG
Leu
>WENV180984607
ODVH01007565
340284
Actinomycetota
GAC
Val
>WENV180984595
ODVH01004512
412586
Actinomycetota
CCC
Gly
>WENV180984530
ODVH01000090
175774
Actinomycetota
GTC
Asp
>WENV180984603
ODVH01006565
147156
Actinomycetota
GAA
Phe
>WENV180984579
ODVH01001742
338489
Actinomycetota
CAT
Met
>WENV180984518
ODVH01000012
246757
Actinomycetota
GTG
His
>WENV180984598
ODVH01005808
238649
Actinomycetota
TAC
Val
>WENV180984524
ODVH01000036
368647
Actinomycetota
CTG
Gln
>WENV180984604
ODVH01006700
359306
Actinomycetota
TCC
Gly
>WENV180984517
ODVH01000012
239209
Actinomycetota
TCT
Arg
>WENV180984590
ODVH01003624
237803
Actinomycetota
CGT
Thr
>WENV180984577
ODVH01001742
96033
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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