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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181029633
ODXF01001334
243647
Bacillota
TTT
Lys
>WENV181030179
ODXF01061330
178679
Bacillota
CAT
Met
>WENV181029537
ODXF01000625
16842
Bacillota
CGA
Ser
>WENV181030267
ODXF01113524
241761
Bacillota
TAC
Val
>WENV181029496
ODXF01000451
16834
Bacillota
GCT
Ser
>WENV181029536
ODXF01000604
114002
Bacillota
CAA
Leu
>WENV181029306
ODXF01000067
37437
Bacillota
TAA
Leu
>WENV181030256
ODXF01107184
162028
Bacillota
ACG
Arg
>WENV181029748
ODXF01003021
243612
Bacillota
TAC
Val
>WENV181030246
ODXF01099222
286137
Bacillota
GAA
Phe
>WENV181030051
ODXF01023238
338676
Bacillota
CCG
Arg
>WENV181029635
ODXF01001334
147135
Bacillota
ACG
Arg
>WENV181030042
ODXF01021618
342895
Bacillota
CAT
Met
>WENV181029377
ODXF01000210
190275
Bacillota
TCT
Arg
>WENV181029594
ODXF01000924
194150
Bacillota
TGG
Pro
>WENV181029303
ODXF01000067
250349
Bacillota
GAA
Phe
>WENV181030182
ODXF01062249
96694
Bacillota
TAG
Leu
>WENV181029302
ODXF01000067
235197
Bacillota
GTC
Asp
>WENV181030229
ODXF01090990
368876
Bacillota
GCC
Gly
>WENV181029660
ODXF01001600
368876
Bacillota
GCC
Gly
>WENV181029304
ODXF01000067
368876
Bacillota
GCC
Gly
>WENV181030266
ODXF01113524
241526
Bacillota
CTT
Lys
>WENV181030270
ODXF01115443
147183
Bacillota
GTT
Asn
>WENV181029631
ODXF01001334
243613
Bacillota
GTG
His
>WENV181030254
ODXF01104922
127572
Bacillota
ACG
Arg
>WENV181030156
ODXF01051776
256920
Bacillota
TTT
Lys
>WENV181029716
ODXF01002289
152491
Bacillota
CAT
Met
>WENV181029712
ODXF01002289
273029
Bacillota
TGT
Thr
>WENV181029715
ODXF01002289
281472
Bacillota
GGT
Thr
>WENV181029596
ODXF01000924
178024
Bacillota
TCT
Arg
>WENV181029579
ODXF01000825
413657
Bacillota
CCC
Gly
>WENV181030230
ODXF01090990
287034
Bacillota
GTT
Asn
>WENV181029746
ODXF01003021
287034
Bacillota
GTT
Asn
>WENV181029632
ODXF01001334
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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