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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181204790
OERZ01020635
254421
Bacillota
TAC
Val
>WENV181204497
OERZ01000782
144612
Bacillota
TCT
Arg
>WENV181204711
OERZ01009506
235134
Bacillota
GAA
Phe
>WENV181204452
OERZ01000161
44854
Bacillota
TGA
Ser
>WENV181204494
OERZ01000731
241441
Bacillota
GCC
Gly
>WENV181204774
OERZ01016983
144577
Bacillota
GAT
Ile
>WENV181204792
OERZ01021324
246023
Bacillota
TGC
Ala
>WENV181204823
OERZ01030739
235150
Bacillota
TGC
Ala
>WENV181204754
OERZ01013967
341763
Bacillota
CTC
Glu
>WENV181204534
OERZ01001236
37111
Bacillota
TAA
Leu
>WENV181204461
OERZ01000257
182792
Bacillota
GTC
Asp
>WENV181204542
OERZ01001262
274189
Bacillota
TGT
Thr
>WENV181204540
OERZ01001250
274189
Bacillota
TGT
Thr
>WENV181204604
OERZ01002260
173314
Bacillota
GAT
Ile
>WENV181204500
OERZ01000810
338149
Bacillota
CTC
Glu
>WENV181204524
OERZ01001236
176449
Bacillota
GTC
Asp
>WENV181204743
OERZ01013084
287000
Bacillota
GTT
Asn
>WENV181204750
OERZ01013710
413152
Bacillota
TCC
Gly
>WENV181204728
OERZ01011752
144610
Bacillota
GTG
His
>WENV181204666
OERZ01004980
411547
Bacillota
CTG
Gln
>WENV181204464
OERZ01000259
235095
Bacillota
GGT
Thr
>WENV181204436
OERZ01000081
411549
Bacillota
TTG
Gln
>WENV181204558
OERZ01001362
235925
Bacillota
TGC
Ala
>WENV181204458
OERZ01000193
80612
Bacillota
GTA
Tyr
>WENV181204431
OERZ01000068
235124
Bacillota
TGG
Pro
>WENV181204420
OERZ01000027
338129
Bacillota
TGT
Thr
>WENV181204426
OERZ01000040
144583
Bacillota
ACG
Arg
>WENV181204818
OERZ01029271
6904
Bacillota
GCT
Ser
>WENV181204460
OERZ01000257
235171
Bacillota
CCA
Trp
>WENV181204501
OERZ01000810
144621
Bacillota
GTT
Asn
>WENV181204566
OERZ01001667
58712
Bacillota
CAG
Leu
>WENV181204597
OERZ01002199
245296
Bacillota
CCC
Gly
>WENV181204499
OERZ01000810
272992
Bacillota
CTT
Lys
>WENV181204421
OERZ01000027
144594
Bacillota
CAC
Val
>WENV181204715
OERZ01010263
272488
Bacillota
GAA
Phe
>WENV181204606
OERZ01002465
272488
Bacillota
GAA
Phe
>WENV181204462
OERZ01000257
249259
Bacillota
GCC
Gly
>WENV181204614
OERZ01002624
273862
Bacillota
TGC
Ala
>WENV181204457
OERZ01000183
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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