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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181221496
OFCV01002014
37110
Bacillota
TAA
Leu
>WENV181221552
OFCV01004852
16842
Bacillota
CGA
Ser
>WENV181221495
OFCV01002014
194265
Bacillota
CAT
Met
>WENV181221538
OFCV01003828
37213
Bacillota
TGA
Ser
>WENV181221414
OFCV01000111
144612
Bacillota
TCT
Arg
>WENV181221550
OFCV01004725
16815
Bacillota
TGA
Ser
>WENV181221541
OFCV01004231
95737
Bacillota
GTA
Tyr
>WENV181221548
OFCV01004711
114359
Bacillota
TAG
Leu
>WENV181221467
OFCV01000844
144668
Bacillota
GTC
Asp
>WENV181221481
OFCV01001326
41154
Bacillota
TAA
Leu
>WENV181221365
OFCV01000012
235117
Bacillota
TAC
Val
>WENV181221534
OFCV01003671
338550
Bacillota
>WENV181221533
OFCV01003671
338550
Bacillota
>WENV181221367
OFCV01000012
235079
Bacillota
GAA
Phe
>WENV181221368
OFCV01000012
271471
Bacillota
GCC
Gly
>WENV181221364
OFCV01000012
271471
Bacillota
GCC
Gly
>WENV181221487
OFCV01001438
258936
Bacillota
GGT
Thr
>WENV181221542
OFCV01004231
312468
Bacillota
TAC
Val
>WENV181221543
OFCV01004290
198159
Bacillota
CAT
Met
>WENV181221568
OFCV01007136
235197
Bacillota
GTC
Asp
>WENV181221570
OFCV01007136
368876
Bacillota
GCC
Gly
>WENV181221555
OFCV01005412
235638
Bacillota
GAA
Phe
>WENV181221544
OFCV01004290
235506
Bacillota
TGC
Ala
>WENV181221556
OFCV01005412
429578
Bacillota
GCA
Cys
>WENV181221576
OFCV01009226
152491
Bacillota
CAT
Met
>WENV181221575
OFCV01009226
281472
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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