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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182556770
OJDH01000061
147023
Gammaproteobacteria
CAT
Met
>WENV182556879
OJDH01000597
166654
Gammaproteobacteria
GAC
Val
>WENV182556763
OJDH01000053
359029
Gammaproteobacteria
GGT
Thr
>WENV182556814
OJDH01000149
10780
Gammaproteobacteria
GCT
Ser
>WENV182556818
OJDH01000167
146646
Gammaproteobacteria
TGG
Pro
>WENV182556821
OJDH01000167
146646
Gammaproteobacteria
TGG
Pro
>WENV182556808
OJDH01000135
237766
Gammaproteobacteria
TAC
Val
>WENV182556877
OJDH01000585
149065
Gammaproteobacteria
CCA
Trp
>WENV182556854
OJDH01000335
149065
Gammaproteobacteria
CCA
Trp
>WENV182556844
OJDH01000265
158396
Gammaproteobacteria
ACG
Arg
>WENV182556838
OJDH01000226
254825
Gammaproteobacteria
GAA
Phe
>WENV182556858
OJDH01000350
163552
Gammaproteobacteria
TGG
Pro
>WENV182556891
OJDH01000954
149066
Gammaproteobacteria
CAT
Met
>WENV182556866
OJDH01000452
283668
Gammaproteobacteria
TTT
Lys
>WENV182556816
OJDH01000158
237225
Gammaproteobacteria
GCC
Gly
>WENV182556823
OJDH01000183
101396
Gammaproteobacteria
CAA
Leu
>WENV182556743
OJDH01000027
147053
Gammaproteobacteria
GTT
Asn
>WENV182556855
OJDH01000346
163551
Gammaproteobacteria
CAT
Met
>WENV182556788
OJDH01000083
266893
Gammaproteobacteria
GCC
Gly
>WENV182556778
OJDH01000066
95866
Gammaproteobacteria
GTA
Tyr
>WENV182556802
OJDH01000112
190137
Gammaproteobacteria
CAT
Met
>WENV182556857
OJDH01000346
342858
Gammaproteobacteria
TTG
Gln
>WENV182556762
OJDH01000053
341109
Gammaproteobacteria
TCC
Gly
>WENV182556781
OJDH01000067
148148
Gammaproteobacteria
GAC
Val
>WENV182556856
OJDH01000346
105103
Gammaproteobacteria
TAG
Leu
>WENV182556820
OJDH01000167
311624
Gammaproteobacteria
GTG
His
>WENV182556870
OJDH01000495
162182
Gammaproteobacteria
CCG
Arg
>WENV182556851
OJDH01000294
146644
Gammaproteobacteria
GGG
Pro
>WENV182556843
OJDH01000264
237221
Gammaproteobacteria
GGC
Ala
>WENV182556791
OJDH01000083
412376
Gammaproteobacteria
GCA
Cys
>WENV182556789
OJDH01000083
412376
Gammaproteobacteria
GCA
Cys
>WENV182556817
OJDH01000161
241230
Gammaproteobacteria
GAA
Phe
>WENV182556734
OJDH01000019
52727
Gammaproteobacteria
GGA
Ser
>WENV182556733
OJDH01000019
52727
Gammaproteobacteria
GGA
Ser
>WENV182556886
OJDH01000827
249995
Gammaproteobacteria
TTT
Lys
>WENV182556804
OJDH01000121
254436
Gammaproteobacteria
GTT
Asn
>WENV182556831
OJDH01000192
277901
Gammaproteobacteria
TGT
Thr
>WENV182556775
OJDH01000065
240197
Gammaproteobacteria
GTT
Asn
>WENV182556774
OJDH01000065
240197
Gammaproteobacteria
GTT
Asn
>WENV182556742
OJDH01000027
148442
Gammaproteobacteria
ACG
Arg
>WENV182556741
OJDH01000027
148442
Gammaproteobacteria
ACG
Arg
>WENV182556783
OJDH01000076
16427
Gammaproteobacteria
TGA
Ser
>WENV182556776
OJDH01000065
149315
Gammaproteobacteria
GAC
Val
>WENV182556884
OJDH01000764
148440
Gammaproteobacteria
>WENV182556873
OJDH01000531
18218
Gammaproteobacteria
TGA
Ser
>WENV182556892
OJDH01001029
193275
Gammaproteobacteria
GAT
Ile
>WENV182556772
OJDH01000061
341850
Gammaproteobacteria
TTG
Gln
>WENV182556769
OJDH01000061
341850
Gammaproteobacteria
TTG
Gln
>WENV182556841
OJDH01000260
151889
Gammaproteobacteria
CAT
Met
>WENV182556861
OJDH01000369
238372
Gammaproteobacteria
CCT
Arg
>WENV182556876
OJDH01000573
193276
Gammaproteobacteria
ACG
Arg
>WENV182556875
OJDH01000573
193276
Gammaproteobacteria
ACG
Arg
>WENV182556723
OJDH01000006
162567
Gammaproteobacteria
CAT
Met
>WENV182556756
OJDH01000047
245151
Gammaproteobacteria
GTG
His
>WENV182556819
OJDH01000167
182279
Gammaproteobacteria
TCT
Arg
>WENV182556888
OJDH01000832
235319
Gammaproteobacteria
TAC
Val
>WENV182556850
OJDH01000273
235319
Gammaproteobacteria
TAC
Val
>WENV182556725
OJDH01000011
150648
Gammaproteobacteria
TGG
Pro
>WENV182556790
OJDH01000083
83313
Gammaproteobacteria
TAA
Leu
>WENV182556760
OJDH01000053
266766
Gammaproteobacteria
TGT
Thr
>WENV182556750
OJDH01000034
59979
Gammaproteobacteria
TAA
Leu
>WENV182556782
OJDH01000075
237711
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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