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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182580114
OJGU01004064
180719
Gammaproteobacteria
ACG
Arg
>WENV182580186
OJGU01011168
176662
Gammaproteobacteria
ACG
Arg
>WENV182579997
OJGU01000990
73123
Gammaproteobacteria
CAA
Leu
>WENV182580208
OJGU01015784
76195
Gammaproteobacteria
CAA
Leu
>WENV182579838
OJGU01000060
73863
Gammaproteobacteria
CAG
Leu
>WENV182579976
OJGU01000830
180053
Gammaproteobacteria
CAT
Met
>WENV182579888
OJGU01000218
177028
Gammaproteobacteria
CAT
Met
>WENV182579971
OJGU01000765
363863
Gammaproteobacteria
CCA
Trp
>WENV182580145
OJGU01005796
180717
Gammaproteobacteria
CCA
Trp
>WENV182579929
OJGU01000451
180052
Gammaproteobacteria
CCT
Arg
>WENV182579873
OJGU01000164
176664
Gammaproteobacteria
CCT
Arg
>WENV182579875
OJGU01000168
176665
Gammaproteobacteria
CGG
Pro
>WENV182579836
OJGU01000052
346373
Gammaproteobacteria
GAA
Phe
>WENV182580117
OJGU01004179
285954
Gammaproteobacteria
GAA
Phe
>WENV182580021
OJGU01001408
176661
Gammaproteobacteria
GAC
Val
>WENV182580084
OJGU01003320
176661
Gammaproteobacteria
GAC
Val
>WENV182580245
OJGU01022934
180680
Gammaproteobacteria
GAC
Val
>WENV182580260
OJGU01026879
178164
Gammaproteobacteria
GAT
Ile
>WENV182580198
OJGU01013807
204522
Gammaproteobacteria
GAT
Ile
>WENV182580226
OJGU01019563
183701
Gammaproteobacteria
GAT
Ile
>WENV182579777
OJGU01000001
176301
Gammaproteobacteria
GAT
Ile
>WENV182580015
OJGU01001181
480516
Gammaproteobacteria
GCA
Cys
>WENV182580190
OJGU01011528
282687
Gammaproteobacteria
GCC
Gly
>WENV182580006
OJGU01001087
306288
Gammaproteobacteria
GCC
Gly
>WENV182580113
OJGU01004064
13469
Gammaproteobacteria
GCT
Ser
>WENV182580022
OJGU01001437
56623
Gammaproteobacteria
GGA
Ser
>WENV182580051
OJGU01001973
282683
Gammaproteobacteria
GGC
Ala
>WENV182580044
OJGU01001925
178006
Gammaproteobacteria
GGG
Pro
>WENV182580003
OJGU01001062
176663
Gammaproteobacteria
GGG
Pro
>WENV182580048
OJGU01001961
140925
Gammaproteobacteria
GTA
Tyr
>WENV182579855
OJGU01000104
281283
Gammaproteobacteria
GTG
His
>WENV182580089
OJGU01003372
196766
Gammaproteobacteria
GTT
Asn
>WENV182580143
OJGU01005738
285955
Gammaproteobacteria
GTT
Asn
>WENV182580031
OJGU01001637
281279
Gammaproteobacteria
TAC
Val
>WENV182579883
OJGU01000197
20273
Gammaproteobacteria
TGA
Ser
>WENV182580088
OJGU01003368
297858
Gammaproteobacteria
TGC
Ala
>WENV182579819
OJGU01000023
243308
Gammaproteobacteria
TGG
Pro
>WENV182579850
OJGU01000099
243308
Gammaproteobacteria
TGG
Pro
>WENV182580239
OJGU01021507
178009
Gammaproteobacteria
TGG
Pro
>WENV182580097
OJGU01003607
281275
Gammaproteobacteria
TGT
Thr
>WENV182580144
OJGU01005759
362004
Gammaproteobacteria
TGT
Thr
>WENV182579903
OJGU01000272
281282
Gammaproteobacteria
TTC
Glu
>WENV182579948
OJGU01000616
281282
Gammaproteobacteria
TTC
Glu
>WENV182580152
OJGU01006493
287558
Gammaproteobacteria
TTC
Glu
>WENV182580153
OJGU01006493
287558
Gammaproteobacteria
TTC
Glu
>WENV182580166
OJGU01007777
285547
Gammaproteobacteria
TTG
Gln
>WENV182579943
OJGU01000574
329164
Gammaproteobacteria
TTT
Lys
>WENV182579847
OJGU01000093
351236
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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