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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
150 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183711360
PDWI01067712
147023
Gammaproteobacteria
CAT
Met
>WENV183704641
PDWI01000448
238419
Gammaproteobacteria
GTT
Asn
>WENV183705117
PDWI01001079
70057
Gammaproteobacteria
CAG
Leu
>WENV183705435
PDWI01001546
70057
Gammaproteobacteria
CAG
Leu
>WENV183716169
PDWI01291690
70057
Gammaproteobacteria
CAG
Leu
>WENV183706946
PDWI01006035
236030
Gammaproteobacteria
CCA
Trp
>WENV183712673
PDWI01109625
236030
Gammaproteobacteria
CCA
Trp
>WENV183714289
PDWI01176407
236030
Gammaproteobacteria
CCA
Trp
>WENV183715514
PDWI01244905
236030
Gammaproteobacteria
CCA
Trp
>WENV183705708
PDWI01002152
145322
Gammaproteobacteria
GAC
Val
>WENV183707965
PDWI01011833
145322
Gammaproteobacteria
GAC
Val
>WENV183705007
PDWI01000880
115067
Gammaproteobacteria
GTA
Tyr
>WENV183704333
PDWI01000159
149066
Gammaproteobacteria
CAT
Met
>WENV183709371
PDWI01027467
281920
Gammaproteobacteria
CCA
Trp
>WENV183704774
PDWI01000623
283668
Gammaproteobacteria
TTT
Lys
>WENV183707312
PDWI01007805
249887
Gammaproteobacteria
GGT
Thr
>WENV183716391
PDWI01305392
173648
Gammaproteobacteria
TCT
Arg
>WENV183715935
PDWI01275372
173648
Gammaproteobacteria
TCT
Arg
>WENV183704237
PDWI01000109
290337
Gammaproteobacteria
TAC
Val
>WENV183704235
PDWI01000109
290337
Gammaproteobacteria
TAC
Val
>WENV183704213
PDWI01000089
290337
Gammaproteobacteria
TAC
Val
>WENV183704211
PDWI01000089
290337
Gammaproteobacteria
TAC
Val
>WENV183705318
PDWI01001378
61925
Gammaproteobacteria
TAA
Leu
>WENV183704086
PDWI01000025
61925
Gammaproteobacteria
TAA
Leu
>WENV183704620
PDWI01000416
171935
Gammaproteobacteria
ACG
Arg
>WENV183707624
PDWI01009447
99112
Gammaproteobacteria
TAG
Leu
>WENV183714480
PDWI01186033
23665
Gammaproteobacteria
>WENV183709050
PDWI01023320
23665
Gammaproteobacteria
>WENV183709589
PDWI01030567
59211
Gammaproteobacteria
TAA
Leu
>WENV183707522
PDWI01008856
59211
Gammaproteobacteria
TAA
Leu
>WENV183707345
PDWI01007960
59211
Gammaproteobacteria
TAA
Leu
>WENV183707085
PDWI01006636
59211
Gammaproteobacteria
TAA
Leu
>WENV183706092
PDWI01003069
59211
Gammaproteobacteria
TAA
Leu
>WENV183705652
PDWI01002033
59211
Gammaproteobacteria
TAA
Leu
>WENV183704655
PDWI01000461
59211
Gammaproteobacteria
TAA
Leu
>WENV183704361
PDWI01000179
235452
Gammaproteobacteria
GAA
Phe
>WENV183704216
PDWI01000089
235452
Gammaproteobacteria
GAA
Phe
>WENV183714942
PDWI01212213
417674
Gammaproteobacteria
GCA
Cys
>WENV183708475
PDWI01016521
417674
Gammaproteobacteria
GCA
Cys
>WENV183705954
PDWI01002730
236025
Gammaproteobacteria
TTG
Gln
>WENV183705953
PDWI01002730
236025
Gammaproteobacteria
TTG
Gln
>WENV183716390
PDWI01305355
16453
Gammaproteobacteria
TGA
Ser
>WENV183712910
PDWI01118635
16453
Gammaproteobacteria
TGA
Ser
>WENV183712277
PDWI01094419
16453
Gammaproteobacteria
TGA
Ser
>WENV183711245
PDWI01064045
16453
Gammaproteobacteria
TGA
Ser
>WENV183704189
PDWI01000071
16453
Gammaproteobacteria
TGA
Ser
>WENV183704775
PDWI01000623
148148
Gammaproteobacteria
GAC
Val
>WENV183704073
PDWI01000018
148148
Gammaproteobacteria
GAC
Val
>WENV183705055
PDWI01000966
145366
Gammaproteobacteria
ACG
Arg
>WENV183704115
PDWI01000037
145366
Gammaproteobacteria
ACG
Arg
>WENV183713654
PDWI01146954
159514
Gammaproteobacteria
TGG
Pro
>WENV183704567
PDWI01000363
159514
Gammaproteobacteria
TGG
Pro
>WENV183705536
PDWI01001782
149073
Gammaproteobacteria
CAT
Met
>WENV183704341
PDWI01000167
149073
Gammaproteobacteria
CAT
Met
>WENV183708924
PDWI01021450
339913
Gammaproteobacteria
TTT
Lys
>WENV183715549
PDWI01246326
95983
Gammaproteobacteria
>WENV183705705
PDWI01002148
245841
Gammaproteobacteria
GAA
Phe
>WENV183716212
PDWI01294183
426403
Gammaproteobacteria
GCA
Cys
>WENV183716200
PDWI01293453
426403
Gammaproteobacteria
GCA
Cys
>WENV183710362
PDWI01045050
426403
Gammaproteobacteria
GCA
Cys
>WENV183709401
PDWI01027818
426403
Gammaproteobacteria
GCA
Cys
>WENV183708838
PDWI01020396
426403
Gammaproteobacteria
GCA
Cys
>WENV183705970
PDWI01002789
289927
Gammaproteobacteria
GAA
Phe
>WENV183708207
PDWI01013889
237462
Gammaproteobacteria
GTG
His
>WENV183712287
PDWI01094754
145596
Gammaproteobacteria
TCT
Arg
>WENV183711846
PDWI01082171
145596
Gammaproteobacteria
TCT
Arg
>WENV183712395
PDWI01098451
340856
Gammaproteobacteria
TTG
Gln
>WENV183708914
PDWI01021364
340856
Gammaproteobacteria
TTG
Gln
>WENV183708913
PDWI01021364
340856
Gammaproteobacteria
TTG
Gln
>WENV183704635
PDWI01000434
421020
Gammaproteobacteria
GCA
Cys
>WENV183715574
PDWI01248222
279824
Gammaproteobacteria
>WENV183713393
PDWI01136599
23731
Gammaproteobacteria
GGA
Ser
>WENV183706164
PDWI01003331
292565
Gammaproteobacteria
TTC
Glu
>WENV183707307
PDWI01007805
96362
Gammaproteobacteria
TAG
Leu
>WENV183706546
PDWI01004649
158933
Gammaproteobacteria
CAT
Met
>WENV183707646
PDWI01009658
162437
Gammaproteobacteria
TCT
Arg
>WENV183707595
PDWI01009258
293820
Gammaproteobacteria
TTT
Lys
>WENV183707594
PDWI01009258
293820
Gammaproteobacteria
TTT
Lys
>WENV183706008
PDWI01002910
147051
Gammaproteobacteria
CAT
Met
>WENV183709319
PDWI01026878
377665
Gammaproteobacteria
GGT
Thr
>WENV183709022
PDWI01022892
377665
Gammaproteobacteria
GGT
Thr
>WENV183705124
PDWI01001090
153036
Gammaproteobacteria
CCT
Arg
>WENV183704454
PDWI01000262
153036
Gammaproteobacteria
CCT
Arg
>WENV183707309
PDWI01007805
267607
Gammaproteobacteria
TGT
Thr
>WENV183704528
PDWI01000334
236032
Gammaproteobacteria
GAA
Phe
>WENV183715891
PDWI01271055
6981
Gammaproteobacteria
>WENV183710174
PDWI01041018
6981
Gammaproteobacteria
>WENV183709253
PDWI01026021
6981
Gammaproteobacteria
>WENV183704254
PDWI01000117
6981
Gammaproteobacteria
>WENV183713921
PDWI01159246
238433
Gammaproteobacteria
TTC
Glu
>WENV183705676
PDWI01002068
238433
Gammaproteobacteria
TTC
Glu
>WENV183705123
PDWI01001089
238433
Gammaproteobacteria
TTC
Glu
>WENV183705077
PDWI01000996
238433
Gammaproteobacteria
TTC
Glu
>WENV183704592
PDWI01000377
238433
Gammaproteobacteria
TTC
Glu
>WENV183705581
PDWI01001860
186449
Gammaproteobacteria
TGG
Pro
>WENV183704920
PDWI01000783
186449
Gammaproteobacteria
TGG
Pro
>WENV183704450
PDWI01000253
243485
Gammaproteobacteria
TGT
Thr
>WENV183715583
PDWI01248609
240082
Gammaproteobacteria
TTT
Lys
>WENV183713401
PDWI01137128
240082
Gammaproteobacteria
TTT
Lys
>WENV183713015
PDWI01121625
240082
Gammaproteobacteria
TTT
Lys
>WENV183712152
PDWI01090606
240082
Gammaproteobacteria
TTT
Lys
>WENV183711557
PDWI01072944
240082
Gammaproteobacteria
TTT
Lys
>WENV183711556
PDWI01072944
240082
Gammaproteobacteria
TTT
Lys
>WENV183707546
PDWI01008969
240082
Gammaproteobacteria
TTT
Lys
>WENV183707545
PDWI01008969
240082
Gammaproteobacteria
TTT
Lys
>WENV183705249
PDWI01001268
240082
Gammaproteobacteria
TTT
Lys
>WENV183704064
PDWI01000017
240082
Gammaproteobacteria
TTT
Lys
>WENV183714317
PDWI01177591
278259
Gammaproteobacteria
TTT
Lys
>WENV183711615
PDWI01074831
278259
Gammaproteobacteria
TTT
Lys
>WENV183709167
PDWI01024871
278259
Gammaproteobacteria
TTT
Lys
>WENV183707147
PDWI01006969
278259
Gammaproteobacteria
TTT
Lys
>WENV183704773
PDWI01000623
243921
Gammaproteobacteria
TTT
Lys
>WENV183704072
PDWI01000018
243921
Gammaproteobacteria
TTT
Lys
>WENV183704071
PDWI01000018
243921
Gammaproteobacteria
TTT
Lys
>WENV183716395
PDWI01305544
262546
Gammaproteobacteria
TGC
Ala
>WENV183716112
PDWI01287196
262546
Gammaproteobacteria
TGC
Ala
>WENV183714423
PDWI01183002
262546
Gammaproteobacteria
TGC
Ala
>WENV183715724
PDWI01259007
149661
Gammaproteobacteria
CAT
Met
>WENV183713838
PDWI01155280
149661
Gammaproteobacteria
CAT
Met
>WENV183713437
PDWI01138613
149661
Gammaproteobacteria
CAT
Met
>WENV183712903
PDWI01118218
149661
Gammaproteobacteria
CAT
Met
>WENV183712760
PDWI01113003
149661
Gammaproteobacteria
CAT
Met
>WENV183711714
PDWI01077957
149661
Gammaproteobacteria
CAT
Met
>WENV183711260
PDWI01064593
149661
Gammaproteobacteria
CAT
Met
>WENV183710952
PDWI01057227
149661
Gammaproteobacteria
CAT
Met
>WENV183710209
PDWI01041722
149661
Gammaproteobacteria
CAT
Met
>WENV183710184
PDWI01041219
149661
Gammaproteobacteria
CAT
Met
>WENV183710124
PDWI01039890
149661
Gammaproteobacteria
CAT
Met
>WENV183710088
PDWI01039189
149661
Gammaproteobacteria
CAT
Met
>WENV183709302
PDWI01026780
149661
Gammaproteobacteria
CAT
Met
>WENV183709134
PDWI01024312
149661
Gammaproteobacteria
CAT
Met
>WENV183707425
PDWI01008332
149661
Gammaproteobacteria
CAT
Met
>WENV183707314
PDWI01007812
149661
Gammaproteobacteria
CAT
Met
>WENV183705335
PDWI01001405
149661
Gammaproteobacteria
CAT
Met
>WENV183712227
PDWI01092830
196013
Gammaproteobacteria
GAT
Ile
>WENV183705006
PDWI01000880
237421
Gammaproteobacteria
TGT
Thr
>WENV183705571
PDWI01001843
411735
Gammaproteobacteria
GCA
Cys
>WENV183713871
PDWI01157320
235453
Gammaproteobacteria
GAA
Phe
>WENV183716227
PDWI01295739
173617
Gammaproteobacteria
GTC
Asp
>WENV183715454
PDWI01241694
173617
Gammaproteobacteria
GTC
Asp
>WENV183714559
PDWI01190758
173617
Gammaproteobacteria
GTC
Asp
>WENV183714138
PDWI01169549
173617
Gammaproteobacteria
GTC
Asp
>WENV183712846
PDWI01116026
173617
Gammaproteobacteria
GTC
Asp
>WENV183712111
PDWI01089332
173617
Gammaproteobacteria
GTC
Asp
>WENV183711320
PDWI01066485
173617
Gammaproteobacteria
GTC
Asp
>WENV183710055
PDWI01038865
173617
Gammaproteobacteria
GTC
Asp
>WENV183706842
PDWI01005703
173617
Gammaproteobacteria
GTC
Asp
>WENV183705852
PDWI01002417
150183
Gammaproteobacteria
CCG
Arg
>WENV183715640
PDWI01252398
237306
Gammaproteobacteria
GAA
Phe
>WENV183707770
PDWI01010533
81707
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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