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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170861803
MDTB01069332
273758
Gammaproteobacteria
GAC
Val
>WENV170857563
MDTB01010821
275457
Gammaproteobacteria
ACG
Arg
>WENV170868687
MDTB01165562
275457
Gammaproteobacteria
ACG
Arg
>WENV170870145
MDTB01187504
454867
Gammaproteobacteria
GTG
His
>WENV170863222
MDTB01088659
457453
Gammaproteobacteria
TTT
Lys
>WENV170863223
MDTB01088659
457453
Gammaproteobacteria
TTT
Lys
>WENV170859344
MDTB01034842
275465
Gammaproteobacteria
GAC
Val
>WENV170867829
MDTB01152201
278579
Gammaproteobacteria
GTC
Asp
>WENV170870762
MDTB01196975
271464
Gammaproteobacteria
TGG
Pro
>WENV170863460
MDTB01091486
271464
Gammaproteobacteria
TGG
Pro
>WENV170862486
MDTB01078291
271464
Gammaproteobacteria
TGG
Pro
>WENV170859987
MDTB01044510
271464
Gammaproteobacteria
TGG
Pro
>WENV170859372
MDTB01035253
271464
Gammaproteobacteria
TGG
Pro
>WENV170872789
MDTB01222995
271464
Gammaproteobacteria
TGG
Pro
>WENV170869668
MDTB01180108
30610
Gammaproteobacteria
TGA
Ser
>WENV170858310
MDTB01020781
30610
Gammaproteobacteria
TGA
Ser
>WENV170858891
MDTB01028688
30610
Gammaproteobacteria
TGA
Ser
>WENV170860731
MDTB01054951
30610
Gammaproteobacteria
TGA
Ser
>WENV170865498
MDTB01120102
180480
Gammaproteobacteria
GTA
Tyr
>WENV170863006
MDTB01085168
274150
Gammaproteobacteria
CAT
Met
>WENV170869904
MDTB01183719
274150
Gammaproteobacteria
CAT
Met
>WENV170865957
MDTB01126631
656944
Gammaproteobacteria
CCT
Arg
>WENV170873396
MDTB01231627
274166
Gammaproteobacteria
GAC
Val
>WENV170874086
MDTB01241470
30549
Gammaproteobacteria
GGA
Ser
>WENV170870144
MDTB01187504
281965
Gammaproteobacteria
TCT
Arg
>WENV170872854
MDTB01224026
270982
Gammaproteobacteria
GAT
Ile
>WENV170863072
MDTB01086231
270982
Gammaproteobacteria
GAT
Ile
>WENV170864753
MDTB01109921
270982
Gammaproteobacteria
GAT
Ile
>WENV170864665
MDTB01108802
272023
Gammaproteobacteria
GAT
Ile
>WENV170859542
MDTB01037567
272023
Gammaproteobacteria
GAT
Ile
>WENV170857453
MDTB01009056
272023
Gammaproteobacteria
GAT
Ile
>WENV170862052
MDTB01072583
467367
Gammaproteobacteria
GGT
Thr
>WENV170858509
MDTB01023836
467367
Gammaproteobacteria
GGT
Thr
>WENV170856907
MDTB01001682
467367
Gammaproteobacteria
GGT
Thr
>WENV170869525
MDTB01177438
454859
Gammaproteobacteria
GAA
Phe
>WENV170872771
MDTB01222683
454859
Gammaproteobacteria
GAA
Phe
>WENV170863139
MDTB01087502
454859
Gammaproteobacteria
GAA
Phe
>WENV170870467
MDTB01192344
273752
Gammaproteobacteria
CAT
Met
>WENV170863114
MDTB01086868
273752
Gammaproteobacteria
CAT
Met
>WENV170860960
MDTB01057859
456247
Gammaproteobacteria
CCA
Trp
>WENV170863896
MDTB01097943
456247
Gammaproteobacteria
CCA
Trp
>WENV170865538
MDTB01120714
458351
Gammaproteobacteria
TTG
Gln
>WENV170865116
MDTB01114909
276971
Gammaproteobacteria
ACG
Arg
>WENV170859094
MDTB01031433
276971
Gammaproteobacteria
ACG
Arg
>WENV170859093
MDTB01031433
276971
Gammaproteobacteria
ACG
Arg
>WENV170869127
MDTB01171837
454857
Gammaproteobacteria
GTG
His
>WENV170868940
MDTB01169451
463212
Gammaproteobacteria
GTG
His
>WENV170860582
MDTB01053071
457171
Gammaproteobacteria
GTT
Asn
>WENV170858211
MDTB01019135
274864
Gammaproteobacteria
ACG
Arg
>WENV170870355
MDTB01190884
276976
Gammaproteobacteria
TCT
Arg
>WENV170873206
MDTB01228966
276976
Gammaproteobacteria
TCT
Arg
>WENV170858883
MDTB01028585
276976
Gammaproteobacteria
TCT
Arg
>WENV170864654
MDTB01108634
276976
Gammaproteobacteria
TCT
Arg
>WENV170865467
MDTB01119610
276976
Gammaproteobacteria
TCT
Arg
>WENV170866814
MDTB01137653
276976
Gammaproteobacteria
TCT
Arg
>WENV170859186
MDTB01032604
655146
Gammaproteobacteria
CCG
Arg
>WENV170868012
MDTB01155227
278155
Gammaproteobacteria
TGG
Pro
>WENV170862836
MDTB01082906
278155
Gammaproteobacteria
TGG
Pro
>WENV170866010
MDTB01127368
655147
Gammaproteobacteria
TTG
Gln
>WENV170858892
MDTB01028688
12370
Gammaproteobacteria
GCT
Ser
>WENV170867959
MDTB01154352
458425
Gammaproteobacteria
TGT
Thr
>WENV170871701
MDTB01209245
273122
Gammaproteobacteria
CAT
Met
>WENV170871702
MDTB01209245
273122
Gammaproteobacteria
CAT
Met
>WENV170861404
MDTB01063906
274776
Gammaproteobacteria
GGG
Pro
>WENV170870143
MDTB01187504
273756
Gammaproteobacteria
TGG
Pro
>WENV170858505
MDTB01023779
273749
Gammaproteobacteria
CCA
Trp
>WENV170867417
MDTB01146404
273749
Gammaproteobacteria
CCA
Trp
>WENV170863374
MDTB01090302
31212
Gammaproteobacteria
TGA
Ser
>WENV170868157
MDTB01157670
282333
Gammaproteobacteria
GAC
Val
>WENV170870750
MDTB01196776
271287
Gammaproteobacteria
CAT
Met
>WENV170870211
MDTB01188406
272104
Gammaproteobacteria
CGG
Pro
>WENV170859459
MDTB01036577
299284
Gammaproteobacteria
TGG
Pro
>WENV170872186
MDTB01215367
278982
Gammaproteobacteria
CCG
Arg
>WENV170871905
MDTB01211901
452412
Gammaproteobacteria
GCC
Gly
>WENV170863364
MDTB01090225
30520
Gammaproteobacteria
TGA
Ser
>WENV170870629
MDTB01194694
780765
Gammaproteobacteria
CCC
Gly
>WENV170863014
MDTB01085228
456510
Gammaproteobacteria
GGC
Ala
>WENV170871336
MDTB01204186
457643
Gammaproteobacteria
CCA
Trp
>WENV170862657
MDTB01080484
275549
Gammaproteobacteria
CAT
Met
>WENV170858426
MDTB01022324
275658
Gammaproteobacteria
TGG
Pro
>WENV170870434
MDTB01191817
180482
Gammaproteobacteria
GAG
Leu
>WENV170866357
MDTB01131901
180482
Gammaproteobacteria
GAG
Leu
>WENV170867865
MDTB01152733
274148
Gammaproteobacteria
GTC
Asp
>WENV170872246
MDTB01216052
781121
Gammaproteobacteria
GCA
Cys
>WENV170871035
MDTB01200679
273754
Gammaproteobacteria
GTT
Asn
>WENV170871857
MDTB01211217
273754
Gammaproteobacteria
GTT
Asn
>WENV170860033
MDTB01045142
273754
Gammaproteobacteria
GTT
Asn
>WENV170858656
MDTB01025584
459731
Gammaproteobacteria
GGT
Thr
>WENV170873078
MDTB01227385
459731
Gammaproteobacteria
GGT
Thr
>WENV170871335
MDTB01204186
459731
Gammaproteobacteria
GGT
Thr
>WENV170863308
MDTB01089647
113485
Gammaproteobacteria
CAA
Leu
>WENV170857393
MDTB01008309
113485
Gammaproteobacteria
CAA
Leu
>WENV170871332
MDTB01204168
113485
Gammaproteobacteria
CAA
Leu
>WENV170863092
MDTB01086568
780241
Gammaproteobacteria
GCA
Cys
>WENV170860101
MDTB01046227
452881
Gammaproteobacteria
TGT
Thr
>WENV170871959
MDTB01212476
452881
Gammaproteobacteria
TGT
Thr
>WENV170862805
MDTB01082453
12740
Gammaproteobacteria
GCT
Ser
>WENV170857486
MDTB01009428
780764
Gammaproteobacteria
TCC
Gly
>WENV170857206
MDTB01005794
276972
Gammaproteobacteria
CCA
Trp
>WENV170870631
MDTB01194719
276972
Gammaproteobacteria
CCA
Trp
>WENV170869239
MDTB01173133
276972
Gammaproteobacteria
CCA
Trp
>WENV170858398
MDTB01022067
459319
Gammaproteobacteria
GAA
Phe
>WENV170858481
MDTB01023270
457459
Gammaproteobacteria
GGC
Ala
>WENV170872408
MDTB01217804
457459
Gammaproteobacteria
GGC
Ala
>WENV170863494
MDTB01091777
453897
Gammaproteobacteria
TAC
Val
>WENV170864012
MDTB01099360
454397
Gammaproteobacteria
TGT
Thr
>WENV170862049
MDTB01072583
454397
Gammaproteobacteria
TGT
Thr
>WENV170858117
MDTB01017875
454397
Gammaproteobacteria
TGT
Thr
>WENV170858082
MDTB01017509
454397
Gammaproteobacteria
TGT
Thr
>WENV170873075
MDTB01227385
454397
Gammaproteobacteria
TGT
Thr
>WENV170868158
MDTB01157670
282474
Gammaproteobacteria
GAC
Val
>WENV170873269
MDTB01229856
466510
Gammaproteobacteria
GCC
Gly
>WENV170868081
MDTB01156431
182178
Gammaproteobacteria
CAA
Leu
>WENV170858469
MDTB01023127
275211
Gammaproteobacteria
CAT
Met
>WENV170873236
MDTB01229341
454860
Gammaproteobacteria
TGT
Thr
>WENV170859521
MDTB01037294
454860
Gammaproteobacteria
TGT
Thr
>WENV170863140
MDTB01087502
454860
Gammaproteobacteria
TGT
Thr
>WENV170867754
MDTB01151094
276372
Gammaproteobacteria
ACG
Arg
>WENV170857559
MDTB01010656
276372
Gammaproteobacteria
ACG
Arg
>WENV170867427
MDTB01146577
273328
Gammaproteobacteria
GAC
Val
>WENV170863091
MDTB01086568
655195
Gammaproteobacteria
GCC
Gly
>WENV170861890
MDTB01070560
274093
Gammaproteobacteria
GTC
Asp
>WENV170869918
MDTB01183895
274093
Gammaproteobacteria
GTC
Asp
>WENV170865115
MDTB01114909
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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