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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745287
PJUL01015668
659854
Bacteroidota
GGT
Thr
>WENV183744829
PJUL01000345
274896
Bacteroidota
GTC
Asp
>WENV183744830
PJUL01000345
274896
Bacteroidota
GTC
Asp
>WENV183745369
PJUL01038216
456396
Bacteroidota
CAT
Met
>WENV183745302
PJUL01020561
452308
Bacteroidota
GCC
Gly
>WENV183745348
PJUL01032382
656129
Bacteroidota
TTC
Glu
>WENV183745171
PJUL01004074
271385
Bacteroidota
CAT
Met
>WENV183744770
PJUL01000204
457188
Bacteroidota
GCC
Gly
>WENV183745303
PJUL01020561
87417
Bacteroidota
TAA
Leu
>WENV183745135
PJUL01002931
242022
Bacteroidota
GAT
Ile
>WENV183745365
PJUL01038126
243544
Bacteroidota
TAC
Val
>WENV183745289
PJUL01015923
180717
Bacteroidota
TAG
Leu
>WENV183745349
PJUL01032382
457377
Bacteroidota
CAT
Met
>WENV183745305
PJUL01020907
454410
Bacteroidota
TTT
Lys
>WENV183745216
PJUL01006634
275135
Bacteroidota
TGG
Pro
>WENV183745301
PJUL01020561
452303
Bacteroidota
GAA
Phe
>WENV183745286
PJUL01015668
454407
Bacteroidota
TCC
Gly
>WENV183744765
PJUL01000200
87589
Bacteroidota
TGA
Ser
>WENV183744626
PJUL01000039
456154
Bacteroidota
TTT
Lys
>WENV183744627
PJUL01000039
456154
Bacteroidota
TTT
Lys
>WENV183745308
PJUL01022145
779589
Bacteroidota
CCA
Trp
>WENV183745158
PJUL01003497
659855
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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