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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180036538
FVAA010158817
153995
Euryarchaeota
TTT
Lys
>WENV180036583
FVAA010188901
147567
Euryarchaeota
GGC
Ala
>WENV180036635
FVAA010227110
127693
Euryarchaeota
CCT
Arg
>WENV180036736
FVAA010298026
163825
Euryarchaeota
TGT
Thr
>WENV180036779
FVAA010328422
147563
Euryarchaeota
TCT
Arg
>WENV180036850
FVAA010383570
163808
Euryarchaeota
TCC
Gly
>WENV180036854
FVAA010385380
147570
Euryarchaeota
CAT
Met
>WENV180036855
FVAA010385382
238271
Euryarchaeota
GTT
Asn
>WENV180036876
FVAA010410590
238541
Euryarchaeota
GTT
Asn
>WENV180037135
FVAA010652290
238270
Euryarchaeota
GAT
Ile
>WENV180037136
FVAA010653128
147810
Euryarchaeota
CTT
Lys
>WENV180037197
FVAA010720644
59292
Euryarchaeota
GAG
Leu
>WENV180037386
FVAA010986548
238272
Euryarchaeota
GTG
His
>WENV180037429
FVAA011042670
127184
Euryarchaeota
CTC
Glu
>WENV180037495
FVAA011132156
127135
Euryarchaeota
TTC
Glu
>WENV180037496
FVAA011135178
348437
Euryarchaeota
GCG
Arg
>WENV180037512
FVAA011167346
238531
Euryarchaeota
GTT
Asn
>WENV180037658
FVAA011425238
238275
Euryarchaeota
GAA
Phe
>WENV180037792
FVAA011731733
45224
Euryarchaeota
GGA
Ser
>WENV180037877
FVAA011916603
129630
Euryarchaeota
CAT
Met
>WENV180038056
FVAA012422441
80999
Euryarchaeota
GGA
Ser
>WENV180038246
FVAA013069629
127190
Euryarchaeota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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