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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656928
JTFO01062378
237463
Gammaproteobacteria
GTT
Asn
>WENV170656307
JTFO01009464
359029
Gammaproteobacteria
GGT
Thr
>WENV170657397
JTFO01140437
359029
Gammaproteobacteria
GGT
Thr
>WENV170656722
JTFO01038139
183605
Gammaproteobacteria
CCG
Arg
>WENV170656324
JTFO01010066
235449
Gammaproteobacteria
>WENV170656325
JTFO01010067
235449
Gammaproteobacteria
>WENV170656326
JTFO01010067
235449
Gammaproteobacteria
>WENV170656327
JTFO01010067
235449
Gammaproteobacteria
>WENV170657108
JTFO01084657
158396
Gammaproteobacteria
ACG
Arg
>WENV170657109
JTFO01084657
158396
Gammaproteobacteria
ACG
Arg
>WENV170657110
JTFO01084657
158396
Gammaproteobacteria
ACG
Arg
>WENV170657257
JTFO01112447
158396
Gammaproteobacteria
ACG
Arg
>WENV170657361
JTFO01135836
158396
Gammaproteobacteria
ACG
Arg
>WENV170657392
JTFO01140338
158396
Gammaproteobacteria
ACG
Arg
>WENV170657393
JTFO01140338
158396
Gammaproteobacteria
ACG
Arg
>WENV170657395
JTFO01140339
158396
Gammaproteobacteria
ACG
Arg
>WENV170657408
JTFO01143564
158396
Gammaproteobacteria
ACG
Arg
>WENV170657464
JTFO01159504
158396
Gammaproteobacteria
ACG
Arg
>WENV170656464
JTFO01017802
144917
Gammaproteobacteria
>WENV170656690
JTFO01033797
114623
Gammaproteobacteria
GAG
Leu
>WENV170656125
JTFO01000505
101028
Gammaproteobacteria
GTA
Tyr
>WENV170656186
JTFO01003444
101028
Gammaproteobacteria
GTA
Tyr
>WENV170656796
JTFO01044601
145368
Gammaproteobacteria
CCT
Arg
>WENV170656299
JTFO01009015
95625
Gammaproteobacteria
TAG
Leu
>WENV170656628
JTFO01029256
3304
Gammaproteobacteria
>WENV170656826
JTFO01047865
145367
Gammaproteobacteria
GGG
Pro
>WENV170657323
JTFO01124952
59216
Gammaproteobacteria
TAA
Leu
>WENV170656504
JTFO01019824
301997
Gammaproteobacteria
TTC
Glu
>WENV170657085
JTFO01081392
301997
Gammaproteobacteria
TTC
Glu
>WENV170657127
JTFO01089069
145196
Gammaproteobacteria
CAT
Met
>WENV170656122
JTFO01000426
148044
Gammaproteobacteria
GAC
Val
>WENV170657360
JTFO01135257
151826
Gammaproteobacteria
TCT
Arg
>WENV170656126
JTFO01000505
340311
Gammaproteobacteria
>WENV170657426
JTFO01148661
96693
Gammaproteobacteria
CAA
Leu
>WENV170656264
JTFO01007442
103203
Gammaproteobacteria
>WENV170656615
JTFO01028488
103203
Gammaproteobacteria
>WENV170656741
JTFO01039138
103203
Gammaproteobacteria
>WENV170657077
JTFO01080267
103203
Gammaproteobacteria
>WENV170657505
JTFO01171297
103203
Gammaproteobacteria
>WENV170656306
JTFO01009464
341109
Gammaproteobacteria
TCC
Gly
>WENV170657396
JTFO01140437
341109
Gammaproteobacteria
TCC
Gly
>WENV170656257
JTFO01007359
7018
Gammaproteobacteria
GCT
Ser
>WENV170656960
JTFO01064806
144952
Gammaproteobacteria
GAT
Ile
>WENV170656303
JTFO01009254
235448
Gammaproteobacteria
CAT
Met
>WENV170656806
JTFO01046115
9227
Gammaproteobacteria
GCT
Ser
>WENV170656647
JTFO01029850
16245
Gammaproteobacteria
TGA
Ser
>WENV170656761
JTFO01041429
16245
Gammaproteobacteria
TGA
Ser
>WENV170656613
JTFO01027951
144954
Gammaproteobacteria
ACG
Arg
>WENV170656807
JTFO01046115
144954
Gammaproteobacteria
ACG
Arg
>WENV170656506
JTFO01019845
95725
Gammaproteobacteria
CAA
Leu
>WENV170656296
JTFO01009015
342890
Gammaproteobacteria
TTG
Gln
>WENV170656300
JTFO01009015
342890
Gammaproteobacteria
TTG
Gln
>WENV170656302
JTFO01009015
342890
Gammaproteobacteria
TTG
Gln
>WENV170656731
JTFO01038656
342890
Gammaproteobacteria
TTG
Gln
>WENV170656734
JTFO01038656
342890
Gammaproteobacteria
TTG
Gln
>WENV170657439
JTFO01152648
342890
Gammaproteobacteria
TTG
Gln
>WENV170656691
JTFO01033797
195299
Gammaproteobacteria
CAT
Met
>WENV170657502
JTFO01171080
59458
Gammaproteobacteria
CAG
Leu
>WENV170656969
JTFO01065247
289927
Gammaproteobacteria
GAA
Phe
>WENV170656160
JTFO01001950
44883
Gammaproteobacteria
GGA
Ser
>WENV170656277
JTFO01008238
97031
Gammaproteobacteria
TAG
Leu
>WENV170656295
JTFO01009015
107081
Gammaproteobacteria
TAG
Leu
>WENV170656730
JTFO01038656
107081
Gammaproteobacteria
TAG
Leu
>WENV170656732
JTFO01038656
107081
Gammaproteobacteria
TAG
Leu
>WENV170656772
JTFO01041989
107081
Gammaproteobacteria
TAG
Leu
>WENV170657440
JTFO01152648
107081
Gammaproteobacteria
TAG
Leu
>WENV170656579
JTFO01026296
193200
Gammaproteobacteria
GAC
Val
>WENV170656580
JTFO01026296
193200
Gammaproteobacteria
GAC
Val
>WENV170656581
JTFO01026296
193200
Gammaproteobacteria
GAC
Val
>WENV170657235
JTFO01107194
195524
Gammaproteobacteria
TCT
Arg
>WENV170657375
JTFO01137503
145237
Gammaproteobacteria
CAT
Met
>WENV170657206
JTFO01102273
163757
Gammaproteobacteria
GGG
Pro
>WENV170656146
JTFO01000972
147777
Gammaproteobacteria
TCT
Arg
>WENV170656562
JTFO01025213
153036
Gammaproteobacteria
CCT
Arg
>WENV170656151
JTFO01001174
145548
Gammaproteobacteria
TCT
Arg
>WENV170656598
JTFO01026887
203169
Gammaproteobacteria
GAC
Val
>WENV170656775
JTFO01042645
193275
Gammaproteobacteria
GAT
Ile
>WENV170657328
JTFO01126797
193275
Gammaproteobacteria
GAT
Ile
>WENV170657340
JTFO01129300
193275
Gammaproteobacteria
GAT
Ile
>WENV170656139
JTFO01000843
58760
Gammaproteobacteria
>WENV170656276
JTFO01008238
147123
Gammaproteobacteria
CAT
Met
>WENV170656999
JTFO01067169
235886
Gammaproteobacteria
TTC
Glu
>WENV170656266
JTFO01007442
237749
Gammaproteobacteria
GGT
Thr
>WENV170656120
JTFO01000378
412230
Gammaproteobacteria
GCA
Cys
>WENV170656836
JTFO01049541
189760
Gammaproteobacteria
TGG
Pro
>WENV170656925
JTFO01062096
189760
Gammaproteobacteria
TGG
Pro
>WENV170657200
JTFO01100664
189760
Gammaproteobacteria
TGG
Pro
>WENV170656714
JTFO01037494
45459
Gammaproteobacteria
GGA
Ser
>WENV170657106
JTFO01084044
45459
Gammaproteobacteria
GGA
Ser
>WENV170657258
JTFO01112998
45459
Gammaproteobacteria
GGA
Ser
>WENV170656218
JTFO01004979
240082
Gammaproteobacteria
TTT
Lys
>WENV170656219
JTFO01004979
240082
Gammaproteobacteria
TTT
Lys
>WENV170656988
JTFO01066650
240082
Gammaproteobacteria
TTT
Lys
>WENV170656989
JTFO01066650
240082
Gammaproteobacteria
TTT
Lys
>WENV170656321
JTFO01010033
146807
Gammaproteobacteria
TCT
Arg
>WENV170656398
JTFO01012563
243921
Gammaproteobacteria
TTT
Lys
>WENV170656978
JTFO01065816
243921
Gammaproteobacteria
TTT
Lys
>WENV170656133
JTFO01000704
293332
Gammaproteobacteria
GAA
Phe
>WENV170656140
JTFO01000843
432040
Gammaproteobacteria
GCA
Cys
>WENV170657050
JTFO01072475
182592
Gammaproteobacteria
GAC
Val
>WENV170657463
JTFO01159312
162567
Gammaproteobacteria
CAT
Met
>WENV170656322
JTFO01010033
245151
Gammaproteobacteria
GTG
His
>WENV170656601
JTFO01027010
245151
Gammaproteobacteria
GTG
His
>WENV170656849
JTFO01052104
245151
Gammaproteobacteria
GTG
His
>WENV170657056
JTFO01073189
245151
Gammaproteobacteria
GTG
His
>WENV170657354
JTFO01133788
174397
Gammaproteobacteria
GTC
Asp
>WENV170656301
JTFO01009015
59175
Gammaproteobacteria
CAG
Leu
>WENV170656169
JTFO01002755
238761
Gammaproteobacteria
TAC
Val
>WENV170656170
JTFO01002755
238761
Gammaproteobacteria
TAC
Val
>WENV170656612
JTFO01027951
144916
Gammaproteobacteria
>WENV170656805
JTFO01046115
144916
Gammaproteobacteria
>WENV170657201
JTFO01100664
235489
Gammaproteobacteria
GTG
His
>WENV170656332
JTFO01010255
147127
Gammaproteobacteria
GTT
Asn
>WENV170656333
JTFO01010255
147127
Gammaproteobacteria
GTT
Asn
>WENV170656950
JTFO01063998
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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