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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170696991
LGVF01070462
256826
Bacillota
GAA
Phe
>WENV170696888
LGVF01058446
318890
Bacillota
TGC
Ala
>WENV170699332
LGVF01528473
188598
Bacillota
CAT
Met
>WENV170696395
LGVF01016046
359540
Bacillota
GTT
Asn
>WENV170696390
LGVF01016044
237285
Bacillota
TGT
Thr
>WENV170697557
LGVF01154848
412448
Bacillota
TCC
Gly
>WENV170699881
LGVF01677748
359525
Bacillota
>WENV170699860
LGVF01676817
37279
Bacillota
TGA
Ser
>WENV170697518
LGVF01150340
148104
Bacillota
CAT
Met
>WENV170698881
LGVF01438285
148104
Bacillota
CAT
Met
>WENV170699233
LGVF01509073
148104
Bacillota
CAT
Met
>WENV170699887
LGVF01677974
362119
Bacillota
GCC
Gly
>WENV170697138
LGVF01084966
145264
Bacillota
CAT
Met
>WENV170697565
LGVF01154848
173314
Bacillota
GAT
Ile
>WENV170696396
LGVF01016046
37278
Bacillota
TAA
Leu
>WENV170697560
LGVF01154848
268023
Bacillota
TTT
Lys
>WENV170696400
LGVF01016046
300148
Bacillota
TAC
Val
>WENV170699110
LGVF01483016
37307
Bacillota
TGA
Ser
>WENV170699880
LGVF01677748
148137
Bacillota
CAT
Met
>WENV170698148
LGVF01272009
339328
Bacillota
GCA
Cys
>WENV170698086
LGVF01255299
426344
Bacillota
TCC
Gly
>WENV170698880
LGVF01438285
148143
Bacillota
TGG
Pro
>WENV170698883
LGVF01438285
148143
Bacillota
TGG
Pro
>WENV170696401
LGVF01016046
163943
Bacillota
GTC
Asp
>WENV170697552
LGVF01154848
388132
Bacillota
TTC
Glu
>WENV170699105
LGVF01483016
388132
Bacillota
TTC
Glu
>WENV170699913
LGVF01680268
148140
Bacillota
GTC
Asp
>WENV170699916
LGVF01680269
148140
Bacillota
GTC
Asp
>WENV170697564
LGVF01154848
190106
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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