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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181187920
OEOE01002662
186087
Betaproteobacteria
GGG
Pro
>WENV181188034
OEOE01015631
237516
Betaproteobacteria
GCC
Gly
>WENV181188466
OEOE01143326
248752
Betaproteobacteria
GCC
Gly
>WENV181187813
OEOE01000017
239009
Betaproteobacteria
TAC
Val
>WENV181187837
OEOE01000172
239009
Betaproteobacteria
TAC
Val
>WENV181188737
OEOE01320891
60339
Betaproteobacteria
CAG
Leu
>WENV181187900
OEOE01001629
313235
Betaproteobacteria
TTC
Glu
>WENV181187889
OEOE01001274
85133
Betaproteobacteria
GTA
Tyr
>WENV181187954
OEOE01005371
301533
Betaproteobacteria
GTG
His
>WENV181188269
OEOE01064486
372150
Betaproteobacteria
CAC
Val
>WENV181187876
OEOE01000932
147332
Betaproteobacteria
CAT
Met
>WENV181187877
OEOE01001005
147332
Betaproteobacteria
CAT
Met
>WENV181187892
OEOE01001323
147332
Betaproteobacteria
CAT
Met
>WENV181188157
OEOE01035184
147332
Betaproteobacteria
CAT
Met
>WENV181188266
OEOE01063229
96247
Betaproteobacteria
GAG
Leu
>WENV181187817
OEOE01000039
4627
Betaproteobacteria
GCT
Ser
>WENV181187916
OEOE01002223
59085
Betaproteobacteria
TAG
Leu
>WENV181188327
OEOE01085344
154591
Betaproteobacteria
CAT
Met
>WENV181187936
OEOE01003779
245575
Betaproteobacteria
CGT
Thr
>WENV181188957
OEOE01520909
236106
Betaproteobacteria
CAT
Met
>WENV181188468
OEOE01146194
153173
Betaproteobacteria
CAT
Met
>WENV181187891
OEOE01001274
352197
Betaproteobacteria
GGT
Thr
>WENV181188414
OEOE01124540
21229
Betaproteobacteria
GGA
Ser
>WENV181188097
OEOE01022990
193916
Betaproteobacteria
TTG
Gln
>WENV181188916
OEOE01475305
72012
Betaproteobacteria
CAG
Leu
>WENV181187992
OEOE01009820
304536
Betaproteobacteria
TGT
Thr
>WENV181188946
OEOE01507222
45127
Betaproteobacteria
CGA
Ser
>WENV181187811
OEOE01000007
144934
Betaproteobacteria
TTG
Gln
>WENV181188062
OEOE01018604
238002
Betaproteobacteria
GCC
Gly
>WENV181188450
OEOE01136347
95723
Betaproteobacteria
CAG
Leu
>WENV181188331
OEOE01087964
148851
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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