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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181414275
OGCL01000167
186087
Betaproteobacteria
GGG
Pro
>WENV181415596
OGCL01016086
186087
Betaproteobacteria
GGG
Pro
>WENV181414098
OGCL01000009
175782
Betaproteobacteria
TCT
Arg
>WENV181414507
OGCL01000525
175782
Betaproteobacteria
TCT
Arg
>WENV181416009
OGCL01042713
96057
Betaproteobacteria
GAG
Leu
>WENV181416512
OGCL01096031
237516
Betaproteobacteria
GCC
Gly
>WENV181414984
OGCL01002740
248752
Betaproteobacteria
GCC
Gly
>WENV181414986
OGCL01002740
248752
Betaproteobacteria
GCC
Gly
>WENV181414830
OGCL01001563
303627
Betaproteobacteria
TTT
Lys
>WENV181414650
OGCL01000944
239252
Betaproteobacteria
TTT
Lys
>WENV181415671
OGCL01018445
152292
Betaproteobacteria
TTG
Gln
>WENV181416071
OGCL01046940
266853
Betaproteobacteria
GTG
His
>WENV181416538
OGCL01098749
237238
Betaproteobacteria
GTT
Asn
>WENV181416877
OGCL01171652
147079
Betaproteobacteria
TTG
Gln
>WENV181414106
OGCL01000017
237459
Betaproteobacteria
CTT
Lys
>WENV181414455
OGCL01000404
237459
Betaproteobacteria
CTT
Lys
>WENV181415782
OGCL01025322
99249
Betaproteobacteria
CAA
Leu
>WENV181415877
OGCL01031958
159509
Betaproteobacteria
CAT
Met
>WENV181416079
OGCL01047542
178702
Betaproteobacteria
CAT
Met
>WENV181415147
OGCL01004837
249068
Betaproteobacteria
CGC
Ala
>WENV181415361
OGCL01008927
301533
Betaproteobacteria
GTG
His
>WENV181415941
OGCL01037554
301533
Betaproteobacteria
GTG
His
>WENV181416565
OGCL01103188
301533
Betaproteobacteria
GTG
His
>WENV181415502
OGCL01012619
256728
Betaproteobacteria
GTT
Asn
>WENV181414312
OGCL01000201
48899
Betaproteobacteria
TGA
Ser
>WENV181414317
OGCL01000203
48899
Betaproteobacteria
TGA
Ser
>WENV181416324
OGCL01073569
292518
Betaproteobacteria
TTT
Lys
>WENV181416326
OGCL01073569
292518
Betaproteobacteria
TTT
Lys
>WENV181415707
OGCL01020251
426829
Betaproteobacteria
TCC
Gly
>WENV181415799
OGCL01026307
162406
Betaproteobacteria
CAT
Met
>WENV181414951
OGCL01002446
412422
Betaproteobacteria
GCA
Cys
>WENV181415303
OGCL01007551
154591
Betaproteobacteria
CAT
Met
>WENV181415019
OGCL01003169
153173
Betaproteobacteria
CAT
Met
>WENV181415308
OGCL01007640
153173
Betaproteobacteria
CAT
Met
>WENV181415775
OGCL01024948
162621
Betaproteobacteria
TTG
Gln
>WENV181415776
OGCL01024948
162621
Betaproteobacteria
TTG
Gln
>WENV181415777
OGCL01024948
162621
Betaproteobacteria
TTG
Gln
>WENV181414125
OGCL01000034
147666
Betaproteobacteria
CAT
Met
>WENV181415889
OGCL01033250
147666
Betaproteobacteria
CAT
Met
>WENV181414898
OGCL01002084
4907
Betaproteobacteria
GCT
Ser
>WENV181414985
OGCL01002740
433086
Betaproteobacteria
GCA
Cys
>WENV181416215
OGCL01061923
433086
Betaproteobacteria
GCA
Cys
>WENV181414282
OGCL01000172
339519
Betaproteobacteria
CCT
Arg
>WENV181414534
OGCL01000587
339519
Betaproteobacteria
CCT
Arg
>WENV181417000
OGCL01196377
339519
Betaproteobacteria
CCT
Arg
>WENV181416660
OGCL01122289
254339
Betaproteobacteria
GTG
His
>WENV181414621
OGCL01000835
148851
Betaproteobacteria
CAT
Met
>WENV181415588
OGCL01015697
185916
Betaproteobacteria
CAT
Met
>WENV181414108
OGCL01000017
23608
Betaproteobacteria
CGA
Ser
>WENV181414141
OGCL01000047
23608
Betaproteobacteria
CGA
Ser
>WENV181414192
OGCL01000088
105933
Betaproteobacteria
GAG
Leu
>WENV181415375
OGCL01009377
105933
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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