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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182581549
OJGX01012621
10780
Gammaproteobacteria
GCT
Ser
>WENV182581436
OJGX01006602
146646
Gammaproteobacteria
TGG
Pro
>WENV182581079
OJGX01000057
14613
Gammaproteobacteria
TGA
Ser
>WENV182581080
OJGX01000057
14613
Gammaproteobacteria
TGA
Ser
>WENV182581081
OJGX01000057
14613
Gammaproteobacteria
TGA
Ser
>WENV182581471
OJGX01008093
149065
Gammaproteobacteria
CCA
Trp
>WENV182581571
OJGX01014765
149066
Gammaproteobacteria
CAT
Met
>WENV182581408
OJGX01005281
279385
Gammaproteobacteria
TTT
Lys
>WENV182581135
OJGX01000214
145368
Gammaproteobacteria
CCT
Arg
>WENV182581280
OJGX01002075
237225
Gammaproteobacteria
GCC
Gly
>WENV182581283
OJGX01002075
237225
Gammaproteobacteria
GCC
Gly
>WENV182581284
OJGX01002075
237225
Gammaproteobacteria
GCC
Gly
>WENV182581071
OJGX01000040
58822
Gammaproteobacteria
CAA
Leu
>WENV182581246
OJGX01001418
58822
Gammaproteobacteria
CAA
Leu
>WENV182581316
OJGX01002835
290337
Gammaproteobacteria
TAC
Val
>WENV182581342
OJGX01003316
147053
Gammaproteobacteria
GTT
Asn
>WENV182581103
OJGX01000132
108171
Gammaproteobacteria
GTA
Tyr
>WENV182581348
OJGX01003471
145260
Gammaproteobacteria
CAT
Met
>WENV182581684
OJGX01040128
171935
Gammaproteobacteria
ACG
Arg
>WENV182581047
OJGX01000005
145367
Gammaproteobacteria
GGG
Pro
>WENV182581427
OJGX01006215
145367
Gammaproteobacteria
GGG
Pro
>WENV182581261
OJGX01001665
145196
Gammaproteobacteria
CAT
Met
>WENV182581605
OJGX01018953
240619
Gammaproteobacteria
TGT
Thr
>WENV182581168
OJGX01000432
198730
Gammaproteobacteria
GAC
Val
>WENV182581203
OJGX01000774
417674
Gammaproteobacteria
GCA
Cys
>WENV182581177
OJGX01000534
149036
Gammaproteobacteria
CCA
Trp
>WENV182581233
OJGX01001204
149036
Gammaproteobacteria
CCA
Trp
>WENV182581271
OJGX01001795
338534
Gammaproteobacteria
TCC
Gly
>WENV182581161
OJGX01000412
145261
Gammaproteobacteria
CAT
Met
>WENV182581381
OJGX01004101
145366
Gammaproteobacteria
ACG
Arg
>WENV182581120
OJGX01000165
16284
Gammaproteobacteria
TGA
Ser
>WENV182581355
OJGX01003654
16284
Gammaproteobacteria
TGA
Ser
>WENV182581694
OJGX01043609
311624
Gammaproteobacteria
GTG
His
>WENV182581069
OJGX01000038
145369
Gammaproteobacteria
CGG
Pro
>WENV182581683
OJGX01039933
237425
Gammaproteobacteria
TTC
Glu
>WENV182581514
OJGX01011048
174801
Gammaproteobacteria
TGG
Pro
>WENV182581604
OJGX01018792
146644
Gammaproteobacteria
GGG
Pro
>WENV182581633
OJGX01023818
45345
Gammaproteobacteria
GGA
Ser
>WENV182581448
OJGX01007185
237221
Gammaproteobacteria
GGC
Ala
>WENV182581200
OJGX01000688
98737
Gammaproteobacteria
GAG
Leu
>WENV182581063
OJGX01000028
340801
Gammaproteobacteria
CCT
Arg
>WENV182581089
OJGX01000070
241230
Gammaproteobacteria
GAA
Phe
>WENV182581195
OJGX01000622
241230
Gammaproteobacteria
GAA
Phe
>WENV182581270
OJGX01001795
95983
Gammaproteobacteria
>WENV182581405
OJGX01005173
289927
Gammaproteobacteria
GAA
Phe
>WENV182581475
OJGX01008466
249995
Gammaproteobacteria
TTT
Lys
>WENV182581361
OJGX01003732
277901
Gammaproteobacteria
TGT
Thr
>WENV182581407
OJGX01005256
240197
Gammaproteobacteria
GTT
Asn
>WENV182581052
OJGX01000015
149038
Gammaproteobacteria
TGG
Pro
>WENV182581056
OJGX01000015
149038
Gammaproteobacteria
TGG
Pro
>WENV182581121
OJGX01000182
309581
Gammaproteobacteria
GAA
Phe
>WENV182581128
OJGX01000201
59830
Gammaproteobacteria
CAA
Leu
>WENV182581573
OJGX01014765
340988
Gammaproteobacteria
TTG
Gln
>WENV182581574
OJGX01014765
340988
Gammaproteobacteria
TTG
Gln
>WENV182581281
OJGX01002075
413604
Gammaproteobacteria
GCA
Cys
>WENV182581664
OJGX01032786
319098
Gammaproteobacteria
TAC
Val
>WENV182581315
OJGX01002786
149315
Gammaproteobacteria
GAC
Val
>WENV182581074
OJGX01000045
311863
Gammaproteobacteria
GGC
Ala
>WENV182581275
OJGX01002003
145365
Gammaproteobacteria
GAC
Val
>WENV182581384
OJGX01004245
145365
Gammaproteobacteria
GAC
Val
>WENV182581143
OJGX01000274
145713
Gammaproteobacteria
CAT
Met
>WENV182581340
OJGX01003283
148452
Gammaproteobacteria
CCT
Arg
>WENV182581562
OJGX01013554
241136
Gammaproteobacteria
TTG
Gln
>WENV182581598
OJGX01017948
250885
Gammaproteobacteria
TGC
Ala
>WENV182581272
OJGX01001795
319100
Gammaproteobacteria
GGT
Thr
>WENV182581397
OJGX01004836
341850
Gammaproteobacteria
TTG
Gln
>WENV182581070
OJGX01000040
235886
Gammaproteobacteria
TTC
Glu
>WENV182581075
OJGX01000045
235886
Gammaproteobacteria
TTC
Glu
>WENV182581292
OJGX01002190
235886
Gammaproteobacteria
TTC
Glu
>WENV182581304
OJGX01002594
235886
Gammaproteobacteria
TTC
Glu
>WENV182581478
OJGX01008653
151889
Gammaproteobacteria
CAT
Met
>WENV182581053
OJGX01000015
154796
Gammaproteobacteria
TCT
Arg
>WENV182581550
OJGX01012621
193276
Gammaproteobacteria
ACG
Arg
>WENV182581702
OJGX01046166
237421
Gammaproteobacteria
TGT
Thr
>WENV182581172
OJGX01000466
149037
Gammaproteobacteria
GAC
Val
>WENV182581180
OJGX01000566
411735
Gammaproteobacteria
GCA
Cys
>WENV182581344
OJGX01003321
411735
Gammaproteobacteria
GCA
Cys
>WENV182581603
OJGX01018734
175964
Gammaproteobacteria
CAT
Met
>WENV182581163
OJGX01000413
150297
Gammaproteobacteria
TCT
Arg
>WENV182581112
OJGX01000140
198797
Gammaproteobacteria
TGG
Pro
>WENV182581162
OJGX01000413
198797
Gammaproteobacteria
TGG
Pro
>WENV182581631
OJGX01023679
150648
Gammaproteobacteria
TGG
Pro
>WENV182581476
OJGX01008466
45439
Gammaproteobacteria
GGA
Ser
>WENV182581076
OJGX01000048
20500
Gammaproteobacteria
GGA
Ser
>WENV182581282
OJGX01002075
67366
Gammaproteobacteria
TAA
Leu
>WENV182581670
OJGX01034512
59485
Gammaproteobacteria
CAG
Leu
>WENV182581262
OJGX01001693
10850
Gammaproteobacteria
TGA
Ser
>WENV182581202
OJGX01000774
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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