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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183508540
OMHE01000300
38355
Actinomycetota
GAG
Leu
>WENV183508617
OMHE01005324
193208
Actinomycetota
CGG
Pro
>WENV183508648
OMHE01008529
345178
Actinomycetota
CTG
Gln
>WENV183508553
OMHE01000731
314498
Actinomycetota
GGC
Ala
>WENV183508640
OMHE01007727
361079
Actinomycetota
CTG
Gln
>WENV183508579
OMHE01002232
259184
Actinomycetota
GTG
His
>WENV183508627
OMHE01006688
158373
Actinomycetota
GGG
Pro
>WENV183508667
OMHE01010808
47025
Actinomycetota
GAG
Leu
>WENV183508573
OMHE01001977
149272
Actinomycetota
TTT
Lys
>WENV183508614
OMHE01004808
173321
Actinomycetota
CAT
Met
>WENV183508626
OMHE01006596
84037
Actinomycetota
CAG
Leu
>WENV183508681
OMHE01012839
235663
Actinomycetota
TTT
Lys
>WENV183508569
OMHE01001823
240122
Actinomycetota
TGT
Thr
>WENV183508610
OMHE01004293
339641
Actinomycetota
GAC
Val
>WENV183508609
OMHE01004293
411803
Actinomycetota
GCA
Cys
>WENV183508600
OMHE01003533
16591
Actinomycetota
GAG
Leu
>WENV183508591
OMHE01002779
149271
Actinomycetota
CAT
Met
>WENV183508634
OMHE01007171
246015
Actinomycetota
GTG
His
>WENV183508556
OMHE01000988
239204
Actinomycetota
CTT
Lys
>WENV183508639
OMHE01007698
155366
Actinomycetota
GAA
Phe
>WENV183508612
OMHE01004437
96366
Actinomycetota
TAG
Leu
>WENV183508632
OMHE01006896
392594
Actinomycetota
GAC
Val
>WENV183508561
OMHE01001216
246807
Actinomycetota
TGC
Ala
>WENV183508596
OMHE01002954
246791
Actinomycetota
TCT
Arg
>WENV183508680
OMHE01012796
23975
Actinomycetota
GCT
Ser
>WENV183508637
OMHE01007698
277211
Actinomycetota
TTC
Glu
>WENV183508538
OMHE01000220
121559
Actinomycetota
>WENV183508644
OMHE01007950
246299
Actinomycetota
CTT
Lys
>WENV183508624
OMHE01006390
37359
Actinomycetota
>WENV183508665
OMHE01010735
284330
Actinomycetota
TTT
Lys
>WENV183508526
OMHE01000047
45767
Actinomycetota
GGA
Ser
>WENV183508588
OMHE01002698
152190
Actinomycetota
GAT
Ile
>WENV183508676
OMHE01011960
152190
Actinomycetota
GAT
Ile
>WENV183508522
OMHE01000013
60896
Actinomycetota
CAG
Leu
>WENV183508577
OMHE01002128
280137
Actinomycetota
CTT
Lys
>WENV183508635
OMHE01007237
240123
Actinomycetota
TAC
Val
>WENV183508664
OMHE01010662
97617
Actinomycetota
GTA
Tyr
>WENV183508567
OMHE01001468
48036
Actinomycetota
CGA
Ser
>WENV183508584
OMHE01002626
363559
Actinomycetota
CAC
Val
>WENV183508641
OMHE01007727
240121
Actinomycetota
CTC
Glu
>WENV183508578
OMHE01002193
340958
Actinomycetota
TTG
Gln
>WENV183508537
OMHE01000216
246806
Actinomycetota
TGT
Thr
>WENV183508598
OMHE01002997
293092
Actinomycetota
CTC
Glu
>WENV183508587
OMHE01002668
59716
Actinomycetota
CAG
Leu
>WENV183508562
OMHE01001227
273134
Actinomycetota
CCT
Arg
>WENV183508563
OMHE01001256
345177
Actinomycetota
CAC
Val
>WENV183508661
OMHE01010027
243424
Actinomycetota
TAC
Val
>WENV183508677
OMHE01012050
37358
Actinomycetota
TGA
Ser
>WENV183508574
OMHE01002074
3306
Actinomycetota
TAT
Ile
>WENV183508554
OMHE01000779
155332
Actinomycetota
TAA
Leu
>WENV183508530
OMHE01000090
345416
Actinomycetota
CTG
Gln
>WENV183508532
OMHE01000092
37773
Actinomycetota
CGA
Ser
>WENV183508528
OMHE01000075
246800
Actinomycetota
CAT
Met
>WENV183508659
OMHE01009791
412870
Actinomycetota
TCC
Gly
>WENV183508620
OMHE01005698
16836
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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